SRR2934719.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934719.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	424882
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1115	0.2624258029288132	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	648	0.15251293300257485	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GACCGAC	20	7.0282596E-4	45.000004	9
CGGTACA	20	7.0282596E-4	45.000004	21
CGCTTAG	20	7.0282596E-4	45.000004	2
TTTACGG	25	3.8866412E-5	45.0	2
TAGCGAG	25	3.8866412E-5	45.0	2
CGCGAAG	25	3.8866412E-5	45.0	2
TCGTGTT	25	3.8866412E-5	45.0	32
TACGAAT	70	0.0	41.785713	12
TCGTACG	70	0.0	41.785713	30
ATGGGCG	55	6.002665E-11	40.909092	5
AAGGTAT	95	0.0	40.263157	6
AGGCGAT	185	0.0	40.135136	7
GGTAATC	45	1.9233994E-8	40.0	8
ACTACGG	40	3.4513687E-7	39.375004	2
CGTAAAG	40	3.4513687E-7	39.375004	2
CGAATAT	75	0.0	39.0	14
TGCACGG	75	0.0	39.0	2
GTACGGT	75	0.0	39.0	32
AGCGTCA	35	6.2389954E-6	38.571426	34
ATAGCGG	35	6.2389954E-6	38.571426	2