SRR2934717.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934717.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	443006
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1290	0.29119244434612623	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	756	0.17065231622145072	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTACGG	30	2.1624692E-6	45.000004	2
TCGATCA	30	2.1624692E-6	45.000004	17
CGATGTC	30	2.1624692E-6	45.000004	10
ATGATCG	25	3.8869115E-5	45.0	27
CGACGTT	20	7.028588E-4	45.0	27
ACGCACT	20	7.028588E-4	45.0	40
TTAACGG	25	3.8869115E-5	45.0	2
AGGCGAT	270	0.0	42.500004	7
GTACGGG	90	0.0	42.5	3
CGTTTTA	315	0.0	40.714287	1
TAACGGG	75	0.0	39.000004	3
GACCGAC	35	6.2395993E-6	38.571426	23
GCCTCGA	35	6.2395993E-6	38.571426	14
AACACGT	70	0.0	38.571426	41
TAGGACC	100	0.0	38.25	6
GATCGTG	30	1.1387895E-4	37.500004	29
AAGGTAT	120	0.0	37.500004	6
TATTGCG	30	1.1387895E-4	37.500004	1
TTACGCA	30	1.1387895E-4	37.500004	1
TCGCGCA	30	1.1387895E-4	37.500004	34