##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934717.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 443006 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.970846895978834 33.0 31.0 34.0 30.0 34.0 2 32.15741547518544 33.0 31.0 34.0 30.0 34.0 3 32.064231635688905 33.0 31.0 34.0 30.0 34.0 4 35.81422373511871 37.0 35.0 37.0 35.0 37.0 5 32.131178810219275 37.0 35.0 37.0 10.0 37.0 6 33.96855121601062 37.0 35.0 37.0 19.0 37.0 7 20.703579635490264 32.0 0.0 37.0 0.0 37.0 8 28.053188895861457 35.0 17.0 37.0 17.0 37.0 9 34.79518787555925 37.0 32.0 39.0 32.0 39.0 10 36.188566294813164 37.0 35.0 39.0 32.0 39.0 11 36.59146828711123 38.0 35.0 39.0 32.0 39.0 12 36.92191527879984 39.0 37.0 39.0 33.0 39.0 13 36.66240637824318 39.0 35.0 39.0 33.0 39.0 14 37.954975779109084 40.0 37.0 41.0 33.0 41.0 15 38.15793465551257 40.0 37.0 41.0 33.0 41.0 16 38.25509135316452 40.0 37.0 41.0 33.0 41.0 17 38.23280045868453 40.0 37.0 41.0 34.0 41.0 18 38.146905459519736 40.0 37.0 41.0 33.0 41.0 19 38.0995404125452 40.0 37.0 41.0 34.0 41.0 20 38.079339783208354 40.0 37.0 41.0 34.0 41.0 21 37.976756522485026 40.0 37.0 41.0 33.0 41.0 22 37.99148769994086 40.0 36.0 41.0 33.0 41.0 23 37.94919707633757 40.0 36.0 41.0 33.0 41.0 24 37.80398685345119 40.0 36.0 41.0 33.0 41.0 25 37.67170873532187 40.0 36.0 41.0 33.0 41.0 26 37.52292294009562 39.0 36.0 41.0 33.0 41.0 27 37.48474964221703 39.0 35.0 41.0 33.0 41.0 28 37.39162900728207 39.0 35.0 41.0 33.0 41.0 29 37.3495708861731 39.0 35.0 41.0 33.0 41.0 30 37.191706207139404 39.0 35.0 41.0 32.0 41.0 31 37.063044292853824 39.0 35.0 41.0 31.0 41.0 32 36.97088075556539 39.0 35.0 41.0 31.0 41.0 33 36.84009923116165 39.0 35.0 41.0 31.0 41.0 34 36.65277671182783 39.0 35.0 41.0 30.0 41.0 35 36.545019706279376 39.0 35.0 41.0 30.0 41.0 36 36.416867943097834 39.0 35.0 41.0 30.0 41.0 37 36.3294650636786 39.0 35.0 41.0 30.0 41.0 38 36.203733132282636 39.0 35.0 40.0 30.0 41.0 39 36.0977571409868 39.0 35.0 40.0 29.0 41.0 40 35.983968614420576 39.0 35.0 40.0 29.0 41.0 41 35.8689137393173 39.0 35.0 40.0 28.0 41.0 42 35.78853108084315 38.0 35.0 40.0 28.0 41.0 43 35.704026582032746 38.0 35.0 40.0 28.0 41.0 44 35.55231757583419 38.0 34.0 40.0 27.0 41.0 45 35.44241838710988 38.0 34.0 40.0 27.0 41.0 46 35.31738847780843 38.0 34.0 40.0 26.0 41.0 47 35.246594854245764 38.0 34.0 40.0 26.0 41.0 48 35.135801772436494 38.0 34.0 40.0 26.0 41.0 49 35.019715308596275 38.0 34.0 40.0 26.0 41.0 50 34.838510087899486 37.0 34.0 40.0 25.0 41.0 51 32.96567992307102 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 10.0 9 27.0 10 18.0 11 10.0 12 10.0 13 8.0 14 20.0 15 33.0 16 41.0 17 75.0 18 176.0 19 314.0 20 548.0 21 868.0 22 1350.0 23 2098.0 24 2899.0 25 3972.0 26 4940.0 27 5713.0 28 6632.0 29 7625.0 30 9516.0 31 12462.0 32 16369.0 33 24419.0 34 32838.0 35 40253.0 36 51039.0 37 82889.0 38 83246.0 39 52579.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.96780179049494 17.563644736188674 22.92993774350686 15.53861572980953 2 31.238628822182996 24.254299038839203 26.312961901193212 18.19411023778459 3 32.914226895346786 23.412323986582575 27.37886168584624 16.294587432224393 4 29.224209152923436 25.947278366432958 26.158787917093672 18.66972456354993 5 23.016166823925634 37.579400730464144 22.7428070951635 16.66162535044672 6 27.413624194706166 35.13564150372681 24.455876444111365 12.994857857455655 7 49.64695737755245 43.079326239373735 4.8450811049963205 2.428635278077498 8 85.34218498169325 4.829505695182458 7.102612605698343 2.7256967174259494 9 79.30976104161117 7.362428499839731 8.9310302794996 4.396780179049493 10 44.6677923098107 25.846602529085384 16.43612050401123 13.04948465709268 11 34.43181356460183 25.301688916177206 23.121583003390473 17.144914515830486 12 31.852164530502975 22.22159519284163 26.93868706067186 18.987553215983528 13 26.64546304113263 24.179356487271054 28.58132846959183 20.593852002004486 14 21.54079177257193 25.699877654027258 29.879505017990727 22.879825555410086 15 21.00648749678334 25.7150016026871 32.58375733060049 20.694753569929077 16 25.045258980691003 24.586574448201603 30.513130747664817 19.85503582344257 17 24.77280217423692 24.838941233301583 27.90503966086238 22.48321693159912 18 25.283630470016206 24.93374807564683 28.88087294528742 20.90174850904954 19 26.166688487289115 26.564200033408124 25.881365037945308 21.387746441357454 20 27.617233175171442 25.600781930718767 27.4775059480007 19.304478946109082 21 26.3416296844738 26.809343440043705 27.496241585892744 19.352785289589757 22 25.87504458178896 24.41885662948132 27.85425028103457 21.851848507695156 23 24.85338799023038 25.507555202412608 28.82918064315156 20.809876164205452 24 23.544827835288913 24.90485456178923 29.93210024243464 21.618217360487215 25 23.76581807018415 26.28000523694939 27.72784115790757 22.226335534958892 26 23.06086147817411 26.72356582077895 27.436422982984425 22.77914971806251 27 23.370563829835262 27.063064608605753 27.978627828968456 21.58774373259053 28 21.79383574940294 27.627165320559993 28.37049611066216 22.208502819374907 29 23.2087150061173 27.139135813058967 27.990365818973107 21.661783361850627 30 23.930375660826265 25.816580362342723 28.25311621061566 21.999927766215354 31 25.501009015679244 25.688591125176636 27.399177437777368 21.411222421366755 32 26.6720992492201 26.538015286474675 26.443208444129425 20.3466770201758 33 25.610036884376285 26.21725213653991 26.458783853943284 21.71392712514052 34 22.63942249089177 26.0635296135944 29.05987729285834 22.237170602655496 35 23.503970600849648 26.613183568619835 28.30480851275152 21.578037317778993 36 25.021105808950665 28.34972889757701 25.846376798508373 20.78278849496395 37 23.76649526191519 28.860105732202275 27.20527487212363 20.168124133758912 38 23.732861405940326 27.988334243779995 26.84071999024844 21.43808436003124 39 23.858819067913302 26.985413290113453 26.790382071574655 22.365385570398594 40 24.564001390500355 25.74795826693092 28.13144742960592 21.556592912962806 41 21.22409177302339 25.83734757542787 28.911120842607097 24.02743980894164 42 22.427912940231057 26.13824643458554 27.48676090165822 23.94707972352519 43 22.67102477167352 25.800553491374835 27.89939639643707 23.629025340514577 44 22.741001250547395 26.995796896656028 26.97525541414789 23.28794643864869 45 23.120228619928398 26.444788558168515 26.7985083723471 23.63647444955599 46 22.373511871171043 28.07840074400798 26.29377480214715 23.254312582673826 47 22.188412798020792 26.67006767402699 28.59013196209532 22.551387565856896 48 22.421366753497697 26.4933206322262 28.70457736464066 22.380735249635446 49 22.73332641092897 26.744333033864105 27.894881784896818 22.627458770310106 50 21.17443104608064 27.081574515920774 28.770264962551295 22.973729475447286 51 21.68345349724383 26.21725213653991 27.473217067037464 24.626077299178792 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 205.0 1 730.0 2 1255.0 3 2665.5 4 4076.0 5 2818.0 6 1560.0 7 1379.0 8 1198.0 9 1183.5 10 1169.0 11 1203.5 12 1238.0 13 1203.0 14 1168.0 15 1169.0 16 1170.0 17 1173.0 18 1176.0 19 1254.5 20 1333.0 21 1435.0 22 1537.0 23 1854.5 24 2172.0 25 2564.0 26 3654.5 27 4353.0 28 5371.5 29 6390.0 30 7479.5 31 8569.0 32 9735.5 33 10902.0 34 12286.0 35 13670.0 36 14460.5 37 15251.0 38 16559.5 39 17868.0 40 19841.0 41 21814.0 42 23368.5 43 24923.0 44 26385.5 45 27848.0 46 28977.0 47 30106.0 48 30186.0 49 30266.0 50 29891.0 51 29516.0 52 28540.0 53 27564.0 54 27048.0 55 26532.0 56 26145.0 57 25758.0 58 25425.0 59 25092.0 60 23651.5 61 22211.0 62 19578.5 63 16946.0 64 14287.0 65 11628.0 66 9837.5 67 8047.0 68 6820.5 69 5594.0 70 4657.5 71 3721.0 72 3136.5 73 2552.0 74 2126.5 75 1311.0 76 921.0 77 705.0 78 489.0 79 383.5 80 278.0 81 199.0 82 120.0 83 99.0 84 78.0 85 60.0 86 42.0 87 32.0 88 22.0 89 17.0 90 12.0 91 8.0 92 4.0 93 2.5 94 1.0 95 1.5 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 443006.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.46096699772022 #Duplication Level Percentage of deduplicated Percentage of total 1 69.10581304509233 28.651938340131966 2 8.850171947495 7.3387337407847895 3 4.767943665197693 5.930506648492523 4 3.3975698735232776 5.634661295943882 5 2.6912195793049447 5.579028308059039 6 2.1427341821174934 5.330389872579625 7 1.7744258165349132 5.149858715347976 8 1.546538241852393 5.129677680492344 9 1.2716196479981117 4.745032223337207 >10 4.416109808404935 24.703783269787337 >50 0.026330422601718934 0.7609275207563385 >100 0.008403326362250333 0.5702310938512655 >500 5.602217574833555E-4 0.175598658636072 >1k 5.602217574833555E-4 0.29963263179964666 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1290 0.29119244434612623 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 756 0.17065231622145072 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0234759800093001 0.0 2 0.0 0.0 0.0 0.10315887369471294 0.0 3 0.0 0.0 0.0 0.1388243048626881 0.0 4 0.0 0.0 0.0 0.18058446161000077 0.0 5 0.0 0.0 0.0 0.3367900209026514 0.0 6 0.0 0.0 0.0 0.49186692731023957 0.0 7 0.0 0.0 0.0 0.6295625792878652 0.0 8 0.0 0.0 0.0 0.9613865274962415 0.0 9 0.0 0.0 0.0 1.1162377033268172 0.0 10 0.0 0.0 0.0 1.484630005011219 0.0 11 0.0 0.0 0.0 1.887559084978533 0.0 12 0.0 0.0 0.0 2.234506981846747 0.0 13 0.0 0.0 0.0 2.37649151478761 0.0 14 0.0 0.0 0.0 2.448048107700573 0.0 15 0.0 0.0 0.0 2.5681367746712236 0.0 16 0.0 0.0 0.0 2.7918357764906117 0.0 17 0.0 0.0 0.0 3.0575206656343257 0.0 18 0.0 0.0 0.0 3.349390301711489 0.0 19 0.0 0.0 0.0 3.51643092870074 0.0 20 0.0 0.0 0.0 3.698595504349828 0.0 21 0.0 0.0 0.0 3.9617973571464042 0.0 22 0.0 0.0 0.0 4.229513821483231 0.0 23 0.0 0.0 0.0 4.502873550245369 0.0 24 0.0 0.0 0.0 4.720026365331395 0.0 25 0.0 0.0 0.0 4.919797925987458 0.0 26 0.0 0.0 0.0 5.111217455294059 0.0 27 0.0 0.0 0.0 5.332884881920335 0.0 28 0.0 0.0 0.0 5.537622515270674 0.0 29 0.0 0.0 0.0 5.7547753303567 0.0 30 0.0 0.0 0.0 6.094725579337526 0.0 31 0.0 0.0 0.0 6.343254944628289 0.0 32 0.0 0.0 0.0 6.586592506647765 0.0 33 0.0 0.0 0.0 6.821352306740766 0.0 34 0.0 0.0 0.0 7.07349336126373 0.0 35 0.0 0.0 0.0 7.3771009873455435 0.0 36 0.0 0.0 0.0 7.623824508020207 0.0 37 0.0 0.0 0.0 7.8901865888949585 0.0 38 0.0 0.0 0.0 8.172349810160584 0.0 39 0.0 0.0 0.0 8.586565418978523 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTACGG 30 2.1624692E-6 45.000004 2 TCGATCA 30 2.1624692E-6 45.000004 17 CGATGTC 30 2.1624692E-6 45.000004 10 ATGATCG 25 3.8869115E-5 45.0 27 CGACGTT 20 7.028588E-4 45.0 27 ACGCACT 20 7.028588E-4 45.0 40 TTAACGG 25 3.8869115E-5 45.0 2 AGGCGAT 270 0.0 42.500004 7 GTACGGG 90 0.0 42.5 3 CGTTTTA 315 0.0 40.714287 1 TAACGGG 75 0.0 39.000004 3 GACCGAC 35 6.2395993E-6 38.571426 23 GCCTCGA 35 6.2395993E-6 38.571426 14 AACACGT 70 0.0 38.571426 41 TAGGACC 100 0.0 38.25 6 GATCGTG 30 1.1387895E-4 37.500004 29 AAGGTAT 120 0.0 37.500004 6 TATTGCG 30 1.1387895E-4 37.500004 1 TTACGCA 30 1.1387895E-4 37.500004 1 TCGCGCA 30 1.1387895E-4 37.500004 34 >>END_MODULE