##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934716.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 437216 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.98091332430652 33.0 31.0 34.0 30.0 34.0 2 32.181658493742226 33.0 31.0 34.0 30.0 34.0 3 31.932260027080435 33.0 31.0 34.0 30.0 34.0 4 35.760685793749545 37.0 35.0 37.0 35.0 37.0 5 32.10648512405768 37.0 35.0 37.0 0.0 37.0 6 33.970666672765866 37.0 35.0 37.0 19.0 37.0 7 20.596082942984705 32.0 0.0 37.0 0.0 37.0 8 28.012344013027885 35.0 17.0 37.0 17.0 37.0 9 34.82969058771866 37.0 32.0 39.0 32.0 39.0 10 36.23172070555515 37.0 35.0 39.0 32.0 39.0 11 36.694357022615826 38.0 35.0 39.0 33.0 39.0 12 37.022725609309816 39.0 37.0 39.0 34.0 39.0 13 36.78854616482471 39.0 37.0 39.0 33.0 39.0 14 38.05853628412501 40.0 37.0 41.0 33.0 41.0 15 38.26995809851424 40.0 38.0 41.0 33.0 41.0 16 38.36633380297153 40.0 38.0 41.0 34.0 41.0 17 38.35628385054527 40.0 38.0 41.0 34.0 41.0 18 38.24077801361341 40.0 37.0 41.0 34.0 41.0 19 38.17872859181732 40.0 37.0 41.0 34.0 41.0 20 38.10436946497841 40.0 37.0 41.0 34.0 41.0 21 38.01177907487374 40.0 37.0 41.0 33.0 41.0 22 37.98811342677303 40.0 36.0 41.0 34.0 41.0 23 37.9477192051526 40.0 36.0 41.0 34.0 41.0 24 37.81738774427286 40.0 36.0 41.0 33.0 41.0 25 37.66901257044573 40.0 35.0 41.0 33.0 41.0 26 37.541311388421285 39.0 35.0 41.0 33.0 41.0 27 37.49123545341433 39.0 35.0 41.0 33.0 41.0 28 37.38654349337627 39.0 35.0 41.0 33.0 41.0 29 37.33170332284271 39.0 35.0 41.0 33.0 41.0 30 37.146561425016465 39.0 35.0 41.0 32.0 41.0 31 37.01085275927688 39.0 35.0 41.0 32.0 41.0 32 36.90475417185098 39.0 35.0 41.0 31.0 41.0 33 36.70354698821635 39.0 35.0 41.0 31.0 41.0 34 36.49835550391568 39.0 35.0 41.0 30.0 41.0 35 36.29920222498719 39.0 35.0 41.0 30.0 41.0 36 36.10124972553612 39.0 35.0 41.0 29.0 41.0 37 36.03459159774574 39.0 35.0 40.0 29.0 41.0 38 35.85930524043036 39.0 35.0 40.0 28.0 41.0 39 35.74800556246798 39.0 35.0 40.0 27.0 41.0 40 35.62003220376199 39.0 35.0 40.0 26.0 41.0 41 35.482640159555004 39.0 35.0 40.0 26.0 41.0 42 35.40621111761692 38.0 35.0 40.0 26.0 41.0 43 35.35519285662007 38.0 34.0 40.0 25.0 41.0 44 35.19952609236624 38.0 34.0 40.0 25.0 41.0 45 35.09089100124424 38.0 34.0 40.0 24.0 41.0 46 35.00499981702408 38.0 34.0 40.0 24.0 41.0 47 34.93870764107444 38.0 34.0 40.0 24.0 41.0 48 34.788443240869505 38.0 34.0 40.0 23.0 41.0 49 34.68251161897094 38.0 34.0 40.0 24.0 41.0 50 34.51672857351973 37.0 34.0 40.0 23.0 41.0 51 32.659522981775595 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 12.0 9 23.0 10 17.0 11 21.0 12 7.0 13 16.0 14 12.0 15 32.0 16 38.0 17 81.0 18 155.0 19 300.0 20 500.0 21 894.0 22 1473.0 23 2397.0 24 3595.0 25 5001.0 26 6002.0 27 6669.0 28 7153.0 29 7728.0 30 9139.0 31 11670.0 32 15723.0 33 23027.0 34 31392.0 35 39280.0 36 50971.0 37 81941.0 38 80996.0 39 50939.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.804160872429186 19.14728646710093 23.17138439581351 18.877168264656373 2 33.54337444192344 24.130864378247825 25.287729634780064 17.03803154504867 3 32.03382309888019 23.022259020712873 29.15286723267218 15.791050647734759 4 28.181722535314353 24.740402912976652 29.62929078533265 17.448583766376345 5 22.069411915391935 35.96689050720926 25.575687989460587 16.388009587938228 6 26.157093976432698 33.39836602503111 27.351469296640563 13.093070701895632 7 48.14874112566786 43.09929188318817 6.471629583546805 2.2803374075971603 8 83.94752250603821 3.933296128229525 9.30249579155383 2.8166855741784382 9 78.40289467906022 6.040263851277173 11.194466808168045 4.362374661494547 10 42.270639683817606 24.29279806777428 19.828871770475008 13.607690477933104 11 31.78543328697943 24.725993559247602 26.214502671448436 17.27407048232453 12 29.350938666471492 21.339109273219645 30.44307619117324 18.866875869135622 13 25.216140305935742 22.62863207201932 31.9620050501354 20.193222571909537 14 21.12822952499451 23.51217704750055 33.377552514089146 21.982040913415794 15 20.65569421064188 24.63633535826685 34.576502232306225 20.13146819878504 16 25.569055112347215 23.62470723852741 31.191905145282885 19.614332503842494 17 24.84790126619337 24.516943570226157 29.262195345092586 21.37295981848789 18 25.209964868623292 23.80196516138476 31.193506184586106 19.794563785405842 19 24.679105979653077 25.436168850179314 28.504675034765427 21.380050135402183 20 25.286586035277757 26.57908219278343 29.517218034106712 18.6171137378321 21 25.317234501939545 26.101972480421576 30.30767401010027 18.273119007538607 22 25.272176681548707 22.705710678474713 31.08943862987631 20.93267401010027 23 23.833985947449314 24.317957256825 31.00389738710386 20.844159408621827 24 23.003503988875064 24.225096977237794 32.021700944155754 20.749698089731393 25 22.96073336748884 25.587581424284565 30.089017785259458 21.36266742296714 26 22.227457366610555 26.0077398814316 29.528654029129765 22.236148722828077 27 22.49643196955281 25.532459928273436 30.947174851789505 21.02393325038425 28 20.95348752104223 25.621431969552805 30.9172125448291 22.507867964575862 29 23.06891788040694 24.905309961209106 30.14528288077289 21.88048927761107 30 23.07760923662446 25.150040254702482 30.587169728463735 21.185180780209325 31 24.296915025982578 25.09194539998536 29.66245517089951 20.948684403132546 32 25.403004464612454 24.424998170240798 29.00259825806924 21.169399107077506 33 24.33648356876235 25.03773878357608 29.375182975920367 21.2505946717412 34 22.59501024665154 24.254830564297738 31.70995571982727 21.44020346922345 35 23.058396764985726 26.12758910927322 30.177761106638368 20.636253019102686 36 24.227384176242406 27.025543438483496 28.52708958501061 20.219982800263487 37 23.256696918685503 27.02485727878211 28.721501500402546 20.99694430212984 38 22.824873746614944 26.608587059942913 29.322119959013392 21.24441923442875 39 22.602558003366756 27.29314572202298 28.373389811900758 21.730906462709505 40 24.657835028910196 25.37944631486496 28.551105174559027 21.41161348166581 41 21.395831808534 25.059695894020344 29.58857864305057 23.955893654395084 42 21.37158749908512 25.25593756861597 29.714374588304178 23.658100343994732 43 21.70208775525141 25.554645758618165 29.84383005196516 22.899436434165263 44 22.568478738198053 25.97732013467028 28.71395374368733 22.74024738344434 45 21.629126107004318 25.87919929737247 28.514509990485255 23.97716460513796 46 22.431475517821855 26.45191392812706 28.279614652711704 22.83699590133938 47 21.0218747712801 25.576374149161968 30.912180707018955 22.489570372538974 48 22.083821269120985 25.99996340481593 30.075523311132258 21.840692014930834 49 22.364918026787674 25.32615457805753 29.79145319475957 22.517474200395228 50 21.526888311498208 25.789541096391716 30.27839786284125 22.405172729268827 51 21.687220961721437 25.793886774500475 28.995736661055403 23.52315560272268 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 271.0 1 578.0 2 885.0 3 4804.5 4 8724.0 5 5685.0 6 2646.0 7 2275.5 8 1905.0 9 1855.5 10 1806.0 11 1823.0 12 1840.0 13 1809.0 14 1778.0 15 1746.0 16 1714.0 17 1648.5 18 1583.0 19 1552.5 20 1522.0 21 1640.0 22 1758.0 23 2012.5 24 2267.0 25 2738.5 26 4021.0 27 4832.0 28 5600.5 29 6369.0 30 7293.5 31 8218.0 32 9752.0 33 11286.0 34 12402.0 35 13518.0 36 14495.5 37 15473.0 38 16771.0 39 18069.0 40 19370.0 41 20671.0 42 22465.5 43 24260.0 44 26600.0 45 28940.0 46 29393.0 47 29846.0 48 29992.5 49 30139.0 50 28774.0 51 27409.0 52 26162.5 53 24916.0 54 24791.0 55 24666.0 56 24629.5 57 24593.0 58 23495.0 59 22397.0 60 20623.5 61 18850.0 62 16961.5 63 15073.0 64 13246.0 65 11419.0 66 9879.5 67 8340.0 68 7061.0 69 5782.0 70 4874.5 71 3967.0 72 3263.5 73 2560.0 74 2117.5 75 1305.5 76 936.0 77 741.5 78 547.0 79 416.0 80 285.0 81 205.0 82 125.0 83 97.5 84 70.0 85 53.0 86 36.0 87 29.5 88 23.0 89 15.5 90 8.0 91 5.5 92 3.0 93 3.5 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 437216.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.48259489899528 #Duplication Level Percentage of deduplicated Percentage of total 1 69.4927290103078 32.30202371011794 2 9.696766133124374 9.014617039926344 3 5.511734502624482 7.685991662289271 4 3.794188231727355 7.054548581836715 5 2.9083809656880684 6.759454712001359 6 2.238782113195815 6.243864122087859 7 1.7095294771385816 5.562435630760673 8 1.2780532639664024 4.752578570263117 9 0.9673682221102249 4.046920666785978 >10 2.3790210984455995 14.03064490250006 >50 0.014589233039932124 0.46234985225694525 >100 0.007294616519959303 0.6919505122562346 >500 5.210440371399502E-4 0.16178611907146123 >1k 0.0010420880742799004 1.230833917846057 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3222 0.7369355192856619 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1860 0.4254190148576448 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 668 0.15278489350801433 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02447302934933763 0.0 2 0.0 0.0 0.0 0.1022377955061114 0.0 3 0.0 0.0 0.0 0.14592329649418137 0.0 4 0.0 0.0 0.0 0.2017309522066896 0.0 5 0.0 0.0 0.0 0.42290309595257264 0.0 6 0.0 0.0 0.0 0.6616866720339604 0.0 7 0.0 0.0 0.0 0.8638750640415721 0.0 8 0.0 0.0 0.0 1.359053648539852 0.0 9 0.0 0.0 0.0 1.6216240942691942 0.0 10 0.0 0.0 0.0 2.1129144404596354 0.0 11 0.0 0.0 0.0 2.542679133426041 0.0 12 0.0 0.0 0.0 2.9207531288882382 0.0 13 0.0 0.0 0.0 3.101441850252507 0.0 14 0.0 0.0 0.0 3.2336419527190223 0.0 15 0.0 0.0 0.0 3.348230622850033 0.0 16 0.0 0.0 0.0 3.5161110297884797 0.0 17 0.0 0.0 0.0 3.7018315889628925 0.0 18 0.0 0.0 0.0 3.9513650003659517 0.0 19 0.0 0.0 0.0 4.120389006806704 0.0 20 0.0 0.0 0.0 4.289870453048379 0.0 21 0.0 0.0 0.0 4.47536229232233 0.0 22 0.0 0.0 0.0 4.683039961941009 0.0 23 0.0 0.0 0.0 4.894377149967064 0.0 24 0.0 0.0 0.0 5.080326429041938 0.0 25 0.0 0.0 0.0 5.250265315084535 0.0 26 0.0 0.0 0.0 5.411055405108688 0.0 27 0.0 0.0 0.0 5.612328917514455 0.0 28 0.0 0.0 0.0 5.796219717485179 0.0 29 0.0 0.0 0.0 6.0087005050135405 0.0 30 0.0 0.0 0.0 6.3458336382932 0.0 31 0.0 0.0 0.0 6.580042816365366 0.0 32 0.0 0.0 0.0 6.801901119812633 0.0 33 0.0 0.0 0.0 7.014381907340994 0.0 34 0.0 0.0 0.0 7.220915977457366 0.0 35 0.0 0.0 0.0 7.48165666398302 0.0 36 0.0 0.0 0.0 7.707174485837664 0.0 37 0.0 0.0 0.0 7.94572934201859 0.0 38 0.0 0.0 0.0 8.193432994217961 0.0 39 0.0 0.0 0.0 8.648356876235088 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGAT 20 7.028485E-4 45.000004 35 CGGGTAT 25 3.8868267E-5 45.0 6 ACGTTGA 25 3.8868267E-5 45.0 1 CGTTAAG 25 3.8868267E-5 45.0 2 CGGTAAG 30 2.1624055E-6 44.999996 2 CGTTATT 265 0.0 44.150944 1 CGTTTTA 560 0.0 42.99107 1 TTAATCG 95 0.0 42.63158 20 AGGCGAT 235 0.0 41.17021 7 CGTTTTT 1105 0.0 40.723984 1 TTACACG 135 0.0 40.000004 34 CTATACG 40 3.451678E-7 39.375004 1 CGAGATA 160 0.0 39.375004 19 CTAAGGC 75 0.0 39.0 4 TAACGGG 75 0.0 39.0 3 CTTACAC 150 0.0 39.0 33 TCGTTGA 105 0.0 38.57143 24 ACACGCG 140 0.0 38.571426 36 GTCTTAC 155 0.0 37.741936 31 TTAGGCC 60 1.546141E-10 37.499996 5 >>END_MODULE