SRR2934715.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934715.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	400455
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3407	0.8507822352074516	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1929	0.48170206390231113	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	757	0.18903497271853267	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAATCGA	20	7.027774E-4	45.000004	22
TAGCCGT	20	7.027774E-4	45.000004	44
TGCGAAA	20	7.027774E-4	45.000004	1
TCCGGTA	20	7.027774E-4	45.000004	18
CGGGTAT	25	3.8862374E-5	45.0	6
ACTGCGC	25	3.8862374E-5	45.0	27
ACGGGTA	25	3.8862374E-5	45.0	5
TTAACGG	25	3.8862374E-5	45.0	2
ACGTCAT	25	3.8862374E-5	45.0	35
TACGGTT	30	2.1619471E-6	44.999996	33
CGTTTTA	685	0.0	44.014595	1
CACGACC	160	0.0	42.187504	27
CGGTTTA	60	3.6379788E-12	41.249996	1
ACGGGAA	60	3.6379788E-12	41.249996	5
CGTTTTT	1485	0.0	41.060608	1
CAGGCGA	45	1.9228537E-8	40.0	6
GCGAGAC	175	0.0	39.857143	21
TAACGGG	85	0.0	39.705883	3
CGGGTCT	40	3.4506957E-7	39.375004	6
CTCACTA	80	0.0	39.375004	45