##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934715.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 400455 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.891401031326865 31.0 31.0 34.0 30.0 34.0 2 32.07597857437165 33.0 31.0 34.0 30.0 34.0 3 31.73925659562248 33.0 31.0 34.0 30.0 34.0 4 35.62682698430535 37.0 35.0 37.0 33.0 37.0 5 32.04947122647988 37.0 35.0 37.0 0.0 37.0 6 33.92644117316552 37.0 35.0 37.0 19.0 37.0 7 20.870075289358354 32.0 0.0 37.0 0.0 37.0 8 28.15277122273414 35.0 17.0 37.0 17.0 37.0 9 34.88124758087675 37.0 32.0 39.0 32.0 39.0 10 36.25412343459315 37.0 35.0 39.0 32.0 39.0 11 36.664231936172605 38.0 35.0 39.0 33.0 39.0 12 36.98554394376397 39.0 37.0 39.0 33.0 39.0 13 36.779675618983404 39.0 37.0 39.0 33.0 39.0 14 38.100568103781946 40.0 37.0 41.0 33.0 41.0 15 38.25915271378807 40.0 38.0 41.0 33.0 41.0 16 38.337338777141 40.0 38.0 41.0 34.0 41.0 17 38.287338152851135 40.0 37.0 41.0 34.0 41.0 18 38.154222072392656 40.0 37.0 41.0 33.0 41.0 19 38.05579153712652 40.0 37.0 41.0 34.0 41.0 20 38.000791599555505 40.0 36.0 41.0 34.0 41.0 21 37.88000399545517 40.0 36.0 41.0 33.0 41.0 22 37.85618359116505 40.0 36.0 41.0 33.0 41.0 23 37.77661909577855 39.0 36.0 41.0 33.0 41.0 24 37.624399745289736 39.0 35.0 41.0 33.0 41.0 25 37.46098812600667 39.0 35.0 41.0 33.0 41.0 26 37.33587793884456 39.0 35.0 41.0 33.0 41.0 27 37.29096153125819 39.0 35.0 41.0 33.0 41.0 28 37.191399782747126 39.0 35.0 41.0 33.0 41.0 29 37.13565069733178 39.0 35.0 41.0 32.0 41.0 30 36.92600666741581 39.0 35.0 41.0 32.0 41.0 31 36.770403665830116 39.0 35.0 41.0 31.0 41.0 32 36.587279469603324 39.0 35.0 41.0 31.0 41.0 33 36.326001673096854 39.0 35.0 41.0 30.0 41.0 34 36.00966900151078 39.0 35.0 40.0 29.0 41.0 35 35.76837347517199 39.0 35.0 40.0 27.0 41.0 36 35.53448202669463 39.0 35.0 40.0 26.0 41.0 37 35.429513927907 39.0 35.0 40.0 25.0 41.0 38 35.26914884319087 38.0 34.0 40.0 24.0 41.0 39 35.15795033149792 38.0 34.0 40.0 24.0 41.0 40 35.02384787304441 38.0 34.0 40.0 23.0 41.0 41 34.86244646714363 38.0 34.0 40.0 23.0 41.0 42 34.74415602252438 38.0 34.0 40.0 23.0 41.0 43 34.6448864416726 38.0 34.0 40.0 22.0 41.0 44 34.49815584772321 38.0 34.0 40.0 22.0 41.0 45 34.35755578029991 38.0 33.0 40.0 22.0 41.0 46 34.22118090671861 37.0 33.0 40.0 21.0 41.0 47 34.15249653519122 37.0 33.0 40.0 21.0 41.0 48 34.048389956424565 37.0 33.0 40.0 20.0 41.0 49 33.92500280930442 37.0 33.0 40.0 20.0 41.0 50 33.775720118365356 37.0 33.0 40.0 20.0 41.0 51 31.98612578192306 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 9.0 9 18.0 10 15.0 11 21.0 12 8.0 13 18.0 14 24.0 15 35.0 16 54.0 17 102.0 18 185.0 19 356.0 20 606.0 21 973.0 22 1785.0 23 2792.0 24 4191.0 25 6016.0 26 6872.0 27 7372.0 28 7612.0 29 8152.0 30 9292.0 31 11502.0 32 14938.0 33 21212.0 34 28614.0 35 35843.0 36 45536.0 37 71741.0 38 70376.0 39 44177.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.73532606659924 17.9720567854066 22.082880723177386 22.20973642481677 2 32.9395312831654 23.585671298897502 25.884306601241086 17.590490816696008 3 31.162053164525354 22.290394676055985 30.5934499506811 15.954102208737561 4 26.448664643967483 24.923649348865666 30.548501080021474 18.079184927145374 5 21.82792074015807 35.80602065150891 26.23191120100885 16.134147407324168 6 25.70625913023935 32.7320173302868 28.056086201945284 13.505637337528562 7 47.56239777253374 42.315865702763105 7.900263450325255 2.221473074377895 8 82.41475321821427 3.9262838521182153 11.195764817520072 2.4631981121474325 9 77.20992371177785 5.990685595135534 12.793447453521619 4.005943239564995 10 41.41863630120738 25.598132124708144 20.253211971382555 12.730019602701926 11 30.771996853579054 25.437065338177824 27.020514165137154 16.770423643105968 12 27.3426477381978 22.95588767776654 31.077649174064504 18.623815409971158 13 23.842379293553584 23.828644916407587 32.88384462673709 19.445131163301742 14 20.675231923686805 24.685170618421544 34.17662409009751 20.462973367794135 15 20.40528898378095 24.446941603925534 35.05812138692237 20.08964802537114 16 24.37352511518148 23.589916470015357 32.97424179995255 19.06231661485061 17 24.852230587706483 23.85811139828445 31.085390368455883 20.204267645553184 18 25.76419323020065 22.90844164762583 32.01932801438364 19.30803710778989 19 24.329075676418075 25.541696320435502 29.85454046022649 20.274687542919928 20 26.330299284563807 25.579902860496183 30.091271179033853 17.998526675906156 21 24.79654393127817 25.577405701015092 31.342597795008174 18.283452572698554 22 25.64907417812239 21.788465620356845 32.10348228889638 20.45897791262439 23 23.207851069408548 24.52959758274962 31.931927432545482 20.33062391529635 24 22.186263125694524 24.217452647613342 33.54933762844764 20.046946598244496 25 23.078747924236183 24.801038818344136 31.074153150790973 21.046060106628712 26 22.461949532406887 25.19933575557803 31.10461849646028 21.234096215554807 27 21.6019278071194 25.35016418823588 31.86475384250415 21.183154162140568 28 20.66649186550299 26.87917493850745 31.338602339838435 21.115730856151128 29 22.29414041527762 25.698268219899862 30.941803698293192 21.065787666529324 30 22.879974029541398 24.47615836985429 32.10223370915584 20.541633891448477 31 24.06537563521494 24.84274138167834 30.534017555031152 20.557865428075566 32 24.09683984467668 24.55332059781998 30.628160467468255 20.721679090035085 33 24.132549225256273 25.095453921164673 29.614313718145606 21.157683135433444 34 22.248442396773672 25.39661135458416 31.666978811601805 20.687967437040367 35 22.172279032600418 27.104169007753683 30.27456268494587 20.44898927470003 36 23.21259567242262 28.58573372788453 27.99865153388021 20.20301906581264 37 22.770598444269645 27.76341911076151 28.55476895031901 20.911213494649836 38 22.391529635040143 27.55590515788291 29.210023598157097 20.842541608919856 39 22.732391904208963 26.22691688204667 28.329025733228452 22.711665480515915 40 24.470414903047782 25.128416426315063 28.88139741044562 21.51977126019153 41 21.05280243722765 25.718744927644803 29.43202107602602 23.79643155910152 42 22.298635302343584 26.12752993469928 28.894882071643508 22.67895269131363 43 22.41500293416239 25.70975515351288 29.335131288159715 22.540110624165013 44 22.575820004744603 26.15499868899127 28.900375822501907 22.36880548376222 45 22.459951804822015 26.45290981508534 27.866551797330537 23.22058658276211 46 22.016955712876605 26.894907043238312 28.426165237042866 22.66197200684222 47 21.07702488419423 27.099923836635824 30.115993057896645 21.7070582212733 48 21.88485597632693 26.848709592838148 29.94743479292305 21.318999637911876 49 22.78682998089673 26.256383363923536 29.32239577480616 21.634390880373573 50 21.5382502403516 26.70212633129815 29.719943564195727 22.039679864154525 51 21.47931727659787 26.328551272927047 28.384462673708654 23.807668776766427 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 335.0 1 750.0 2 1165.0 3 5458.5 4 9752.0 5 6625.5 6 3499.0 7 3044.5 8 2590.0 9 2552.0 10 2514.0 11 2459.0 12 2404.0 13 2372.0 14 2340.0 15 2244.0 16 2148.0 17 2110.5 18 2073.0 19 2102.0 20 2131.0 21 2177.5 22 2224.0 23 2598.0 24 2972.0 25 3288.5 26 4217.0 27 4829.0 28 5700.5 29 6572.0 30 7168.5 31 7765.0 32 8808.0 33 9851.0 34 11331.5 35 12812.0 36 13367.5 37 13923.0 38 14656.0 39 15389.0 40 16753.0 41 18117.0 42 18969.5 43 19822.0 44 20611.5 45 21401.0 46 22446.0 47 23491.0 48 24428.5 49 25366.0 50 25451.5 51 25537.0 52 25267.5 53 24998.0 54 24151.0 55 23304.0 56 22295.0 57 21286.0 58 20544.5 59 19803.0 60 18445.0 61 17087.0 62 15499.0 63 13911.0 64 12387.5 65 10864.0 66 9357.5 67 7851.0 68 6571.5 69 5292.0 70 4645.0 71 3998.0 72 3447.0 73 2896.0 74 2428.0 75 1580.0 76 1200.0 77 919.0 78 638.0 79 502.0 80 366.0 81 271.0 82 176.0 83 134.0 84 92.0 85 74.5 86 57.0 87 39.0 88 21.0 89 18.0 90 15.0 91 11.0 92 7.0 93 5.5 94 4.0 95 3.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 400455.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.137937274813126 #Duplication Level Percentage of deduplicated Percentage of total 1 70.9723892186327 32.74519642012899 2 9.574027073783983 8.83451721195216 3 5.094457217342399 7.05143242628888 4 3.423604389338549 6.318321782763076 5 2.4535224276241716 5.660023193403562 6 1.9046870854613935 5.272699996629864 7 1.4927798153412286 4.8211647039724514 8 1.1775968742326064 4.3465512574688 9 0.9016118932842558 3.7438661680717056 >10 2.97978928537776 18.651500769473245 >50 0.01887348838591628 0.6325988363431193 >100 0.004995923396271931 0.36163139956132845 >500 5.551025995857701E-4 0.19387745713025895 >1k 0.0011102051991715401 1.3666183768124989 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3407 0.8507822352074516 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1929 0.48170206390231113 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 757 0.18903497271853267 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01498295688654156 0.0 2 0.0 0.0 0.0 0.058683247805621105 0.0 3 0.0 0.0 0.0 0.09688978786630208 0.0 4 0.0 0.0 0.0 0.14208837447403577 0.0 5 0.0 0.0 0.0 0.2801812937783272 0.0 6 0.0 0.0 0.0 0.43675319324268647 0.0 7 0.0 0.0 0.0 0.5718495211696695 0.0 8 0.0 0.0 0.0 0.9254473036920503 0.0 9 0.0 0.0 0.0 1.133960120363087 0.0 10 0.0 0.0 0.0 1.5020414278757912 0.0 11 0.0 0.0 0.0 1.8399071056673035 0.0 12 0.0 0.0 0.0 2.142562834775443 0.0 13 0.0 0.0 0.0 2.286399220886242 0.0 14 0.0 0.0 0.0 2.3865353160779614 0.0 15 0.0 0.0 0.0 2.4829256720480455 0.0 16 0.0 0.0 0.0 2.6190208637674646 0.0 17 0.0 0.0 0.0 2.78932714037782 0.0 18 0.0 0.0 0.0 2.9723689303417364 0.0 19 0.0 0.0 0.0 3.0979760522405764 0.0 20 0.0 0.0 0.0 3.248804484898428 0.0 21 0.0 0.0 0.0 3.4313468429661262 0.0 22 0.0 0.0 0.0 3.6158869286186963 0.0 23 0.0 0.0 0.0 3.8096665043513003 0.0 24 0.0 0.0 0.0 3.97647675768813 0.0 25 0.0 0.0 0.0 4.12256058733191 0.0 26 0.0 0.0 0.0 4.267645553183254 0.0 27 0.0 0.0 0.0 4.433207226779539 0.0 28 0.0 0.0 0.0 4.59677117279095 0.0 29 0.0 0.0 0.0 4.771572336467268 0.0 30 0.0 0.0 0.0 5.00455731605299 0.0 31 2.49715948109026E-4 0.0 0.0 5.200084903422357 0.0 32 2.49715948109026E-4 0.0 0.0 5.419085789913973 0.0 33 2.49715948109026E-4 0.0 0.0 5.606123035047633 0.0 34 2.49715948109026E-4 0.0 0.0 5.782921926308823 0.0 35 2.49715948109026E-4 0.0 0.0 5.987689003758225 0.0 36 2.49715948109026E-4 0.0 0.0 6.181968011387047 0.0 37 2.49715948109026E-4 0.0 0.0 6.387484236680776 0.0 38 2.49715948109026E-4 0.0 0.0 6.646439674869836 0.0 39 2.49715948109026E-4 0.0 0.0 7.038493713401007 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAATCGA 20 7.027774E-4 45.000004 22 TAGCCGT 20 7.027774E-4 45.000004 44 TGCGAAA 20 7.027774E-4 45.000004 1 TCCGGTA 20 7.027774E-4 45.000004 18 CGGGTAT 25 3.8862374E-5 45.0 6 ACTGCGC 25 3.8862374E-5 45.0 27 ACGGGTA 25 3.8862374E-5 45.0 5 TTAACGG 25 3.8862374E-5 45.0 2 ACGTCAT 25 3.8862374E-5 45.0 35 TACGGTT 30 2.1619471E-6 44.999996 33 CGTTTTA 685 0.0 44.014595 1 CACGACC 160 0.0 42.187504 27 CGGTTTA 60 3.6379788E-12 41.249996 1 ACGGGAA 60 3.6379788E-12 41.249996 5 CGTTTTT 1485 0.0 41.060608 1 CAGGCGA 45 1.9228537E-8 40.0 6 GCGAGAC 175 0.0 39.857143 21 TAACGGG 85 0.0 39.705883 3 CGGGTCT 40 3.4506957E-7 39.375004 6 CTCACTA 80 0.0 39.375004 45 >>END_MODULE