SRR2934711.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934711.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	287692
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1498	0.5206957440596193	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	834	0.2898933581747146	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	332	0.11540119294245234	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGGCG	30	2.159808E-6	45.000004	5
TATGCGT	30	2.159808E-6	45.000004	25
TATCGAT	30	2.159808E-6	45.000004	41
ATCGATA	30	2.159808E-6	45.000004	42
ACACGCC	20	7.0244604E-4	45.0	16
CGCATGT	20	7.0244604E-4	45.0	37
TAAACGG	40	6.7848305E-9	45.0	2
CGTTCAT	25	3.8834907E-5	45.0	17
TATTACG	20	7.0244604E-4	45.0	11
CTCGACG	20	7.0244604E-4	45.0	1
CGTTTTA	295	0.0	45.0	1
GTTGGCC	20	7.0244604E-4	45.0	37
AATACGG	20	7.0244604E-4	45.0	2
AACACGG	25	3.8834907E-5	45.0	2
AGGCGAT	155	0.0	42.09677	7
CGTTATT	175	0.0	41.142857	1
TTACGGG	55	6.002665E-11	40.909092	3
GGCGATA	50	1.0750227E-9	40.5	8
ACCTGGT	90	0.0	40.0	11
TACTGAC	40	3.4461846E-7	39.375	20