SRR2934709.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934709.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	703025
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4505	0.6408022474307458	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2695	0.38334340884036844	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAACC	20	7.0314144E-4	45.000004	21
TCGATCA	55	1.8189894E-12	45.000004	17
CGGTCTA	20	7.0314144E-4	45.000004	31
TATACGG	40	6.8084773E-9	45.000004	2
CCACGTA	20	7.0314144E-4	45.000004	34
CGTTTTA	805	0.0	41.64596	1
AGTACGG	55	6.002665E-11	40.909092	2
CGAGGTA	40	3.4556615E-7	39.375004	5
CGTTATT	360	0.0	39.375	1
CACGACC	315	0.0	39.285713	27
ACGACCA	315	0.0	39.285713	28
CGTTTTT	1555	0.0	38.92283	1
AGGCGAT	365	0.0	38.835617	7
AGACACG	325	0.0	38.76923	24
CGTATGG	35	6.244829E-6	38.571426	2
ACTACGG	65	9.094947E-12	38.076927	2
ACACGAC	335	0.0	37.61194	26
CTAGACG	30	1.13947106E-4	37.499996	1
CGGTAAG	30	1.13947106E-4	37.499996	2
TACGTAG	30	1.13947106E-4	37.499996	2