SRR2934706.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934706.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	310067
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1415	0.45635298177490674	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	772	0.2489784465938007	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGCGGA	20	7.025309E-4	45.000004	1
ATTCGCG	20	7.025309E-4	45.000004	39
GAATACG	20	7.025309E-4	45.000004	22
ACGGGTA	20	7.025309E-4	45.000004	5
GGCTTAT	30	2.1603573E-6	45.000004	8
CGGATGT	20	7.025309E-4	45.000004	45
ACGTAAG	20	7.025309E-4	45.000004	2
ATACGCA	20	7.025309E-4	45.000004	24
AATACGC	20	7.025309E-4	45.000004	23
CCATTCG	20	7.025309E-4	45.000004	37
ATACTCG	25	3.8841954E-5	45.0	44
GTGCGTA	25	3.8841954E-5	45.0	1
CACGACC	65	0.0	44.999996	27
AGGCGAT	150	0.0	42.0	7
TCAAGCG	75	0.0	42.0	17
AACACGT	65	0.0	41.53846	41
CGTTTTA	270	0.0	40.833332	1
ACGGGCT	45	1.920489E-8	40.000004	5
ATAGGAT	80	0.0	39.375004	5
GGACCGA	155	0.0	39.193546	8