##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934706.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 310067 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.980765447467807 33.0 31.0 34.0 30.0 34.0 2 32.1581109889153 33.0 31.0 34.0 30.0 34.0 3 32.002757468547124 33.0 31.0 34.0 30.0 34.0 4 35.77976372848449 37.0 35.0 37.0 35.0 37.0 5 31.996220171769327 37.0 35.0 37.0 0.0 37.0 6 33.91202546546391 37.0 35.0 37.0 18.0 37.0 7 20.896464312551803 32.0 0.0 37.0 0.0 37.0 8 28.17063086365205 35.0 17.0 37.0 17.0 37.0 9 34.929270125489005 37.0 32.0 39.0 32.0 39.0 10 36.22823131774746 37.0 35.0 39.0 32.0 39.0 11 36.62582925625752 38.0 35.0 39.0 33.0 39.0 12 36.98330038346551 39.0 37.0 39.0 33.0 39.0 13 36.746390296290805 39.0 37.0 39.0 33.0 39.0 14 38.05135019205527 40.0 37.0 41.0 33.0 41.0 15 38.23417519439347 40.0 38.0 41.0 33.0 41.0 16 38.34111659738057 40.0 38.0 41.0 34.0 41.0 17 38.320991914650705 40.0 37.0 41.0 34.0 41.0 18 38.22934720560395 40.0 37.0 41.0 34.0 41.0 19 38.15780782863059 40.0 37.0 41.0 34.0 41.0 20 38.12286054304392 40.0 37.0 41.0 34.0 41.0 21 38.01280045925558 40.0 37.0 41.0 33.0 41.0 22 38.01103954951672 40.0 37.0 41.0 34.0 41.0 23 37.942128636714 40.0 36.0 41.0 33.0 41.0 24 37.82917885489265 40.0 36.0 41.0 33.0 41.0 25 37.67628609300571 40.0 36.0 41.0 33.0 41.0 26 37.56441672283732 39.0 36.0 41.0 33.0 41.0 27 37.5278181812318 39.0 35.0 41.0 33.0 41.0 28 37.45240867296423 39.0 35.0 41.0 33.0 41.0 29 37.44049834390632 40.0 35.0 41.0 33.0 41.0 30 37.26444929644238 39.0 35.0 41.0 32.0 41.0 31 37.118980736421484 39.0 35.0 41.0 32.0 41.0 32 36.9924790448516 39.0 35.0 41.0 31.0 41.0 33 36.85357358248378 39.0 35.0 41.0 31.0 41.0 34 36.647273008736825 39.0 35.0 41.0 30.0 41.0 35 36.486585157401464 39.0 35.0 41.0 30.0 41.0 36 36.319959879638915 39.0 35.0 41.0 30.0 41.0 37 36.250778057645604 39.0 35.0 41.0 30.0 41.0 38 36.095650294936256 39.0 35.0 41.0 29.0 41.0 39 35.985686964430265 39.0 35.0 40.0 29.0 41.0 40 35.89556773213531 39.0 35.0 40.0 28.0 41.0 41 35.74204607391306 39.0 35.0 40.0 27.0 41.0 42 35.63280194280591 39.0 35.0 40.0 27.0 41.0 43 35.561965639684324 38.0 35.0 40.0 27.0 41.0 44 35.43911799707805 38.0 35.0 40.0 26.0 41.0 45 35.352568960902 38.0 34.0 40.0 26.0 41.0 46 35.234765389415834 38.0 34.0 40.0 26.0 41.0 47 35.19081037324191 38.0 34.0 40.0 26.0 41.0 48 35.086268451657226 38.0 34.0 40.0 25.0 41.0 49 34.96697487962279 38.0 34.0 40.0 25.0 41.0 50 34.80229434283558 38.0 34.0 40.0 24.0 41.0 51 32.99294991082572 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 7.0 10 16.0 11 10.0 12 6.0 13 4.0 14 20.0 15 13.0 16 26.0 17 65.0 18 138.0 19 196.0 20 418.0 21 644.0 22 997.0 23 1614.0 24 2309.0 25 3181.0 26 3944.0 27 4327.0 28 4695.0 29 5511.0 30 6413.0 31 8201.0 32 10963.0 33 15690.0 34 21695.0 35 27438.0 36 35507.0 37 58432.0 38 59384.0 39 38192.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.77398110730907 17.56620343345148 22.238096927438264 17.421718531801194 2 31.402567832113704 24.268303302189526 26.222397094821442 18.106731770875324 3 32.309791109663394 23.212724991695342 28.065869634627354 16.411614264013906 4 27.991692118155107 26.06726933211209 27.35376547649379 18.58727307323901 5 21.689505816484825 37.043929215298625 24.126075977127524 17.140488991089022 6 26.066946821170912 34.77667729877736 25.829256257518534 13.327119622533196 7 49.66313732193365 42.47920610706718 5.517517181770391 2.3401393892287796 8 85.70405751015103 4.048802355619915 7.890552686999906 2.3565874472291473 9 80.88316396133739 5.991608265310401 9.353139805267894 3.772087968084317 10 42.061231927293136 27.13091041613587 17.455582180625477 13.352275475945522 11 31.28227125105219 26.59360718812386 25.50287518504065 16.6212463757833 12 29.07597390241464 24.624677892197493 28.509322178754914 17.790026026632955 13 24.907197476674398 25.668000786926697 30.018350872553352 19.406450863845556 14 21.74175258895658 26.50717425588663 30.78366933598222 20.967403819174564 15 20.196925180686755 26.546198079769855 33.17444294297684 20.082433796566548 16 25.164561207738974 25.459336207980854 30.6240264200963 18.75207616418387 17 25.149725704444524 25.50997042574669 28.666385007111366 20.673918862697416 18 25.697994304456778 24.56307830243141 29.799688454430818 19.939238938680994 19 24.69982294149329 26.283996684587525 28.03910122650911 20.977079147410077 20 26.28012655329332 26.493306285415734 28.815062550997045 18.411504610293903 21 25.189717061151303 27.33086719966975 29.50201085571828 17.97740488346067 22 25.23357854915228 24.650156256551004 29.87612354749135 20.24014164680537 23 23.660692688999475 26.462345235062102 30.300870457030253 19.57609161890817 24 22.654781063447576 25.65445532739698 31.495128472233418 20.195635136922018 25 23.19305182428314 26.766150541657126 29.20304321324101 20.837754420818726 26 22.491913038149818 27.57146036179277 28.613815723698426 21.32281087635898 27 21.66402745213131 27.535984158262565 30.252816326793884 20.54717206281223 28 20.295936039630146 27.881393376270292 30.432454921033198 21.39021566306637 29 21.61145816871837 27.018676608603947 30.13509983326184 21.234765389415834 30 22.626077589682232 26.72293407553851 30.2347557140876 20.41623262069166 31 23.740352891471844 26.378492390354342 29.096614602650394 20.78454011552342 32 23.55523161123241 27.275072806844975 28.502549448990056 20.667146132932558 33 23.64005198876372 26.484921000944954 28.045873956273965 21.829153054017358 34 21.3540944376538 26.982877894132557 30.310545785265763 21.35248188294788 35 22.078776522493527 27.418912686612895 29.84903262843192 20.65327816246166 36 23.182408963224077 28.843121002880025 27.254754617550404 20.7197154163455 37 21.552761177422944 29.155634104887007 27.997497315096414 21.29410740259363 38 22.15263152802459 28.810869908761656 28.35903208016332 20.677466483050438 39 21.81238248507581 28.232607791219316 27.875588179328986 22.079421544375894 40 24.22282925948263 26.665204617066635 28.553183666755892 20.558782456694843 41 21.322165854476612 26.33463090235336 28.80022704770259 23.54297619546743 42 21.728852151309233 26.680362631302266 28.73443481570112 22.85635040168738 43 21.353771926712614 27.627577265558735 28.15810776380589 22.860543043922764 44 21.411501385184494 27.797540531562532 28.355806970751484 22.43515111250149 45 21.504062025304208 28.021685635685188 27.447616160378242 23.02663617863236 46 21.678217933543394 28.298400023220786 27.19702515907852 22.826356884157295 47 20.706492467756966 27.995562249449314 29.13467089371007 22.16327438908365 48 21.383442933301513 27.599841324616936 29.375586566774274 21.64112917530727 49 22.603824334740555 27.268622588021294 28.438692282635685 21.68886079460246 50 21.15188007753163 27.932995126859677 28.7428201001719 22.172304695436793 51 20.921284754585297 27.608549120028897 28.09683068498099 23.373335440404816 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 197.0 1 546.5 2 896.0 3 2577.0 4 4258.0 5 2948.0 6 1638.0 7 1439.0 8 1240.0 9 1192.0 10 1144.0 11 1147.5 12 1151.0 13 1168.0 14 1185.0 15 1147.0 16 1109.0 17 1089.0 18 1069.0 19 1147.5 20 1226.0 21 1426.5 22 1627.0 23 1730.0 24 1833.0 25 2027.0 26 2793.5 27 3366.0 28 4142.0 29 4918.0 30 5770.5 31 6623.0 32 7688.0 33 8753.0 34 9632.5 35 10512.0 36 11162.0 37 11812.0 38 13024.0 39 14236.0 40 15399.5 41 16563.0 42 17908.0 43 19253.0 44 20380.0 45 21507.0 46 22120.5 47 22734.0 48 22303.5 49 21873.0 50 20852.0 51 19831.0 52 18906.5 53 17982.0 54 17461.5 55 16941.0 56 16365.0 57 15789.0 58 14872.5 59 13956.0 60 12740.0 61 11524.0 62 10484.5 63 9445.0 64 8303.5 65 7162.0 66 6166.0 67 5170.0 68 4349.5 69 3529.0 70 2935.0 71 2341.0 72 1924.0 73 1507.0 74 1208.0 75 699.5 76 490.0 77 375.5 78 261.0 79 194.0 80 127.0 81 106.0 82 85.0 83 57.0 84 29.0 85 27.5 86 26.0 87 18.5 88 11.0 89 6.5 90 2.0 91 3.5 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 310067.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.550203590530145 #Duplication Level Percentage of deduplicated Percentage of total 1 68.14168439656801 30.357259128687563 2 9.93896465545939 8.855657977595985 3 5.426455002973056 7.252490254719017 4 3.9549112717625907 7.047684093580236 5 2.9532925444549125 6.578489205893058 6 2.323308705028091 6.210232548759144 7 1.7955374641544466 5.5994091707753375 8 1.3602919828102256 4.848102782140919 9 1.0450445403357425 4.1901252329816385 >10 3.044320384946243 17.72693801436246 >50 0.011037989664064607 0.33078025929674926 >100 0.0036793298880215355 0.28586757790561484 >500 7.358659776043072E-4 0.2530845987879985 >1k 7.358659776043072E-4 0.4638791545142718 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1415 0.45635298177490674 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 772 0.2489784465938007 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0190281455298371 0.0 2 0.0 0.0 0.0 0.0728874727075116 0.0 3 0.0 0.0 0.0 0.09901085894338965 0.0 4 0.0 0.0 0.0 0.1312619530617576 0.0 5 0.0 0.0 0.0 0.2376905636523719 0.0 6 0.0 0.0 0.0 0.34637675083127195 0.0 7 0.0 0.0 0.0 0.45699800365727405 0.0 8 0.0 0.0 0.0 0.7540305804874431 0.0 9 0.0 0.0 0.0 0.8959353946082621 0.0 10 0.0 0.0 0.0 1.1626519429671651 0.0 11 0.0 0.0 0.0 1.479035176268355 0.0 12 0.0 0.0 0.0 1.7293036666268904 0.0 13 0.0 0.0 0.0 1.8550829336885253 0.0 14 0.0 0.0 0.0 1.921842698513547 0.0 15 0.0 0.0 0.0 2.0050505213389362 0.0 16 0.0 0.0 0.0 2.1701761232249805 0.0 17 0.0 0.0 0.0 2.3649727316999227 0.0 18 0.0 0.0 0.0 2.582345106057723 0.0 19 0.0 0.0 0.0 2.7116719934723785 0.0 20 0.0 0.0 0.0 2.8622846030051567 0.0 21 0.0 0.0 0.0 3.064498963127324 0.0 22 0.0 0.0 0.0 3.290901643838267 0.0 23 0.0 0.0 0.0 3.5208519449022306 0.0 24 0.0 0.0 0.0 3.701780582906275 0.0 25 0.0 0.0 0.0 3.876904023969013 0.0 26 0.0 0.0 0.0 4.040417071149139 0.0 27 0.0 0.0 0.0 4.2210231982119994 0.0 28 0.0 0.0 0.0 4.406789500333799 0.0 29 0.0 0.0 0.0 4.6077138166912315 0.0 30 0.0 0.0 0.0 4.886685780815114 0.0 31 0.0 0.0 0.0 5.129859030467609 0.0 32 0.0 0.0 0.0 5.350456514237245 0.0 33 0.0 0.0 0.0 5.549445764947576 0.0 34 0.0 0.0 0.0 5.767463161187743 0.0 35 0.0 0.0 0.0 6.023536848487585 0.0 36 0.0 0.0 0.0 6.251229572963263 0.0 37 0.0 0.0 0.0 6.488597625674451 0.0 38 0.0 0.0 0.0 6.763054436621762 0.0 39 0.0 0.0 0.0 7.200379272866832 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGGA 20 7.025309E-4 45.000004 1 ATTCGCG 20 7.025309E-4 45.000004 39 GAATACG 20 7.025309E-4 45.000004 22 ACGGGTA 20 7.025309E-4 45.000004 5 GGCTTAT 30 2.1603573E-6 45.000004 8 CGGATGT 20 7.025309E-4 45.000004 45 ACGTAAG 20 7.025309E-4 45.000004 2 ATACGCA 20 7.025309E-4 45.000004 24 AATACGC 20 7.025309E-4 45.000004 23 CCATTCG 20 7.025309E-4 45.000004 37 ATACTCG 25 3.8841954E-5 45.0 44 GTGCGTA 25 3.8841954E-5 45.0 1 CACGACC 65 0.0 44.999996 27 AGGCGAT 150 0.0 42.0 7 TCAAGCG 75 0.0 42.0 17 AACACGT 65 0.0 41.53846 41 CGTTTTA 270 0.0 40.833332 1 ACGGGCT 45 1.920489E-8 40.000004 5 ATAGGAT 80 0.0 39.375004 5 GGACCGA 155 0.0 39.193546 8 >>END_MODULE