SRR2934704.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934704.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	373877
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1168	0.3124022071429909	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	717	0.19177430010404492	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCTTCGT	20	7.027173E-4	45.000004	21
CGAAAAG	20	7.027173E-4	45.000004	2
ACCTATC	20	7.027173E-4	45.000004	3
TATACGG	20	7.027173E-4	45.000004	2
CGTTTAG	20	7.027173E-4	45.000004	2
AACACGG	20	7.027173E-4	45.000004	2
CACGGGT	25	3.8857394E-5	45.0	4
ATAACGG	25	3.8857394E-5	45.0	2
TAAGGCG	30	2.1615579E-6	44.999996	5
CGTTATT	75	0.0	42.0	1
CGTTTTA	230	0.0	41.086956	1
AAGGCGA	110	0.0	40.909092	6
ACAACGA	50	1.0768417E-9	40.5	13
CACAACG	50	1.0768417E-9	40.5	12
CGTTTTT	460	0.0	40.108692	1
GTAGCAA	45	1.922308E-8	40.0	1
AGGCGAT	245	0.0	39.489796	7
AGGTACC	40	3.449877E-7	39.375004	7
TTAATCG	35	6.2369872E-6	38.571426	20
CATACGA	70	0.0	38.571426	18