##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934704.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 373877 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.833766185135755 31.0 31.0 34.0 30.0 34.0 2 32.02085445213265 33.0 31.0 34.0 30.0 34.0 3 31.916657082409454 33.0 31.0 34.0 30.0 34.0 4 35.705044707216544 37.0 35.0 37.0 35.0 37.0 5 32.13416979380919 37.0 35.0 37.0 10.0 37.0 6 33.94658136231969 37.0 35.0 37.0 19.0 37.0 7 20.642855805518927 32.0 0.0 37.0 0.0 37.0 8 28.02310385501114 35.0 17.0 37.0 17.0 37.0 9 34.73320370068231 35.0 32.0 39.0 31.0 39.0 10 36.06322667615285 37.0 35.0 39.0 32.0 39.0 11 36.492584459595 37.0 35.0 39.0 32.0 39.0 12 36.86201344292374 39.0 35.0 39.0 33.0 39.0 13 36.65286711940023 39.0 35.0 39.0 33.0 39.0 14 37.94094046972668 40.0 37.0 41.0 33.0 41.0 15 38.126774313477426 40.0 37.0 41.0 33.0 41.0 16 38.22433581097527 40.0 37.0 41.0 34.0 41.0 17 38.19844761779944 40.0 37.0 41.0 34.0 41.0 18 38.08936896358963 40.0 37.0 41.0 33.0 41.0 19 38.0424069948138 40.0 37.0 41.0 33.0 41.0 20 38.03707636468678 40.0 37.0 41.0 34.0 41.0 21 37.94131492442702 40.0 37.0 41.0 33.0 41.0 22 37.9421413994442 40.0 37.0 41.0 33.0 41.0 23 37.8899129927757 40.0 36.0 41.0 33.0 41.0 24 37.7662279305761 40.0 36.0 41.0 33.0 41.0 25 37.62772783562509 39.0 36.0 41.0 33.0 41.0 26 37.499239054555375 39.0 36.0 41.0 33.0 41.0 27 37.43497727862372 39.0 36.0 41.0 33.0 41.0 28 37.377396844416744 39.0 36.0 41.0 33.0 41.0 29 37.33052581463957 39.0 36.0 41.0 32.0 41.0 30 37.13891199512139 39.0 35.0 41.0 32.0 41.0 31 37.003709776209824 39.0 35.0 41.0 31.0 41.0 32 36.89783270968795 39.0 35.0 41.0 31.0 41.0 33 36.724794517983185 39.0 35.0 40.0 31.0 41.0 34 36.59024224544436 39.0 35.0 40.0 30.0 41.0 35 36.38945696044421 39.0 35.0 40.0 30.0 41.0 36 36.19961377672336 39.0 35.0 40.0 30.0 41.0 37 36.106227449134344 39.0 35.0 40.0 29.0 41.0 38 35.95883940440305 39.0 35.0 40.0 29.0 41.0 39 35.88085118902741 39.0 35.0 40.0 28.0 41.0 40 35.73209638463987 39.0 35.0 40.0 27.0 41.0 41 35.623453702688316 38.0 35.0 40.0 27.0 41.0 42 35.477333454585334 38.0 34.0 40.0 26.0 41.0 43 35.328460964434825 38.0 34.0 40.0 26.0 41.0 44 35.14727035896832 38.0 34.0 40.0 25.0 41.0 45 34.9917566472396 38.0 34.0 40.0 24.0 41.0 46 34.795015473003154 38.0 34.0 40.0 23.0 41.0 47 34.70869296586845 38.0 34.0 40.0 23.0 41.0 48 34.59738898086804 38.0 33.0 40.0 23.0 41.0 49 34.471486611907125 38.0 33.0 40.0 23.0 41.0 50 34.2555439355724 37.0 33.0 40.0 22.0 41.0 51 32.18172286607628 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 9.0 9 22.0 10 17.0 11 11.0 12 10.0 13 9.0 14 13.0 15 15.0 16 29.0 17 64.0 18 116.0 19 262.0 20 442.0 21 791.0 22 1225.0 23 1921.0 24 2746.0 25 3748.0 26 4697.0 27 5552.0 28 6245.0 29 7292.0 30 8823.0 31 11325.0 32 14438.0 33 20418.0 34 27548.0 35 34820.0 36 44482.0 37 69209.0 38 66298.0 39 41274.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.892922003760596 18.609596204099212 23.70779694926406 15.789684842876134 2 30.141998571722784 25.20080133305873 26.288324769910957 18.36887532530752 3 31.02089724695555 23.542769413470204 28.77256423904118 16.663769100533063 4 28.08704466977107 25.2815765612755 27.494603840300417 19.136774928653004 5 22.23565504163134 36.669813869267166 24.100974384623818 16.993556704477676 6 25.91788208421486 35.331138315542276 24.904714652144957 13.846264948097902 7 49.222337827681294 43.02377519879533 5.201978190688381 2.5519087828349964 8 84.73508667288975 4.040098749053833 7.688624868606521 3.5361897094498995 9 78.9385279115859 6.472449495422292 9.843344201435231 4.745678391556582 10 40.94555161189375 27.65454949087534 17.434075912666465 13.965822984564442 11 30.05186197599745 25.45141851464519 26.166894459942707 18.329825049414648 12 26.706376696079193 22.889345961372324 30.30247915758391 20.101798184964572 13 23.4280257945795 24.897225558138103 32.29591550162219 19.378833145660206 14 20.148337554864302 26.791163938942486 32.13489998047486 20.92559852571835 15 19.310628896669225 25.195451980196697 34.70553149832699 20.78838762480709 16 22.865273873493155 24.731128151771838 32.058136766904624 20.345461207830382 17 22.7577518809662 25.01758599753395 29.46958491696467 22.755077204535183 18 23.6128459359629 23.613380871249102 31.689031419424037 21.08474177336397 19 23.121775343227853 26.48197134351672 29.0028538797519 21.393399433503532 20 24.712405416754706 26.05322071162441 29.52602058965916 19.708353281961717 21 23.768512104248188 26.957796280594952 30.00746234724254 19.266229267914316 22 23.662594917579845 23.750591772160362 29.91010412515346 22.67670918510633 23 21.846757088561212 25.984214059704126 29.567745541983058 22.6012833097516 24 21.44716042976701 24.842662158945323 30.933435327661236 22.776742083626434 25 21.358361172257187 26.525836036985424 29.40111320033059 22.714689590426797 26 21.46588316478414 27.24773120571739 29.082291769753155 22.204093859745317 27 21.021351941948822 26.21263142691313 30.99682515907638 21.769191472061667 28 19.313303573100242 26.5651537805214 31.41621442346012 22.705328222918233 29 21.27036431767667 25.905311104989075 30.53036158950671 22.29396298782755 30 22.167450792640363 25.301101699221935 31.454462296423692 21.076985211714014 31 23.398336886195192 25.628482094378636 28.663437440655613 22.309743578770558 32 23.800875689063517 25.655228858688822 28.536390310182224 22.00750514206544 33 22.10753804058554 25.367433674711204 29.35778344214809 23.16724484255517 34 21.435124385827425 24.94536973389644 30.867905755101276 22.751600125174857 35 22.044415676813497 25.175659374607157 29.856075661246877 22.923849287332466 36 22.954608066289182 26.024334206169407 29.009808038472546 22.011249689068865 37 21.846222153275008 25.765692995289896 29.583526132926067 22.80455871850903 38 21.345522725388296 26.624264129646917 29.23421339103502 22.79599975392977 39 21.814660971388985 24.992711506725474 28.88490064914397 24.30772687274157 40 23.39084779218834 24.063528914589558 28.97022282729347 23.575400465928634 41 20.710554540664443 23.91561930795422 27.95946260401148 27.41436354736986 42 21.9877125364759 24.220264953447256 29.421440741206332 24.37058176887051 43 21.85772326192839 24.423807829847785 29.685966240234084 24.03250266798974 44 22.158356892774897 24.73861724577869 29.42545275585286 23.67757310559355 45 21.780692580715048 24.955266036691214 28.437694749877636 24.826346632716106 46 22.063940814759935 25.220059003362067 28.49386295492903 24.22213722694897 47 20.39681499530594 25.722630704750493 30.415350502972906 23.465203796970663 48 21.533819946132017 24.980407995142787 29.777975109461135 23.70779694926406 49 22.115294602235494 23.67784057323665 30.425781741053875 23.781083083473977 50 20.75843124877968 24.710265675609893 30.124880642564268 24.406422433046163 51 20.815401856760378 24.195925397924984 28.13652618374492 26.85214656156971 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 176.0 1 502.0 2 828.0 3 2129.5 4 3431.0 5 2320.5 6 1210.0 7 1117.5 8 1025.0 9 1046.0 10 1067.0 11 1100.0 12 1133.0 13 1148.5 14 1164.0 15 1106.0 16 1048.0 17 1087.0 18 1126.0 19 1221.5 20 1317.0 21 1417.0 22 1517.0 23 1736.5 24 1956.0 25 2474.5 26 3585.5 27 4178.0 28 4989.0 29 5800.0 30 6580.5 31 7361.0 32 8174.0 33 8987.0 34 9860.0 35 10733.0 36 12044.0 37 13355.0 38 14821.0 39 16287.0 40 17638.0 41 18989.0 42 20434.5 43 21880.0 44 22857.5 45 23835.0 46 25678.5 47 27522.0 48 29541.0 49 31560.0 50 31773.0 51 31986.0 52 30772.5 53 29559.0 54 26693.0 55 23827.0 56 21272.0 57 18717.0 58 17071.0 59 15425.0 60 13919.0 61 12413.0 62 11290.0 63 10167.0 64 8805.0 65 7443.0 66 6342.0 67 5241.0 68 4315.5 69 3390.0 70 2752.0 71 2114.0 72 1680.5 73 1247.0 74 1062.0 75 699.0 76 521.0 77 381.0 78 241.0 79 178.5 80 116.0 81 84.0 82 52.0 83 44.5 84 37.0 85 23.5 86 10.0 87 8.0 88 6.0 89 5.0 90 4.0 91 4.0 92 4.0 93 3.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 373877.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.76291305106578 #Duplication Level Percentage of deduplicated Percentage of total 1 73.32676492099453 35.75626662158397 2 8.840476506263853 8.621747744098682 3 4.47259307524197 6.542900017224692 4 2.9810127225039293 5.814514567663199 5 2.278019600140649 5.554143584514105 6 1.853132263621157 5.421847646584991 7 1.4555372018570891 4.968336381172418 8 1.1689832556259212 4.560242308179087 9 0.8682709922738902 3.810548061091288 >10 2.733978041233454 17.52127582471274 >50 0.014526761219278329 0.5010335654709209 >100 0.0055872158535685695 0.4135774618732224 >500 5.587215853568569E-4 0.195345876260277 >1k 5.587215853568569E-4 0.3182203395704373 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1168 0.3124022071429909 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 717 0.19177430010404492 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6746764310187575E-4 0.0 0.0 0.06365729905824642 0.0 2 2.6746764310187575E-4 0.0 0.0 0.3009010984896102 0.0 3 2.6746764310187575E-4 0.0 0.0 0.38863048542702544 0.0 4 2.6746764310187575E-4 0.0 0.0 0.5052463778194433 0.0 5 2.6746764310187575E-4 0.0 0.0 0.8692698400810962 0.0 6 2.6746764310187575E-4 0.0 0.0 1.1961152999515883 0.0 7 2.6746764310187575E-4 0.0 0.0 1.494074254367078 0.0 8 2.6746764310187575E-4 0.0 0.0 2.2721376281504346 0.0 9 2.6746764310187575E-4 0.0 0.0 2.6016577644519456 0.0 10 2.6746764310187575E-4 0.0 0.0 3.472264942748551 0.0 11 2.6746764310187575E-4 0.0 0.0 4.58439540276615 0.0 12 2.6746764310187575E-4 0.0 0.0 5.463561545642016 0.0 13 2.6746764310187575E-4 0.0 0.0 5.82063084918302 0.0 14 2.6746764310187575E-4 0.0 0.0 5.972285002821784 0.0 15 2.6746764310187575E-4 0.0 0.0 6.2483116105029195 0.0 16 2.6746764310187575E-4 0.0 0.0 6.8188200932392204 0.0 17 2.6746764310187575E-4 0.0 0.0 7.460207501397519 0.0 18 2.6746764310187575E-4 0.0 0.0 8.176485849624342 0.0 19 2.6746764310187575E-4 0.0 0.0 8.626366425321697 0.0 20 2.6746764310187575E-4 0.0 0.0 9.05030263963817 0.0 21 2.6746764310187575E-4 0.0 0.0 9.574271752474745 0.0 22 2.6746764310187575E-4 0.0 0.0 10.1239177590491 0.0 23 2.6746764310187575E-4 0.0 0.0 10.697903321145724 0.0 24 2.6746764310187575E-4 0.0 0.0 11.143236946910347 0.0 25 2.6746764310187575E-4 0.0 0.0 11.54283360570455 0.0 26 2.6746764310187575E-4 0.0 0.0 11.911136550255833 0.0 27 2.6746764310187575E-4 0.0 0.0 12.311000676693137 0.0 28 2.6746764310187575E-4 0.0 0.0 12.65228938929113 0.0 29 2.6746764310187575E-4 0.0 0.0 13.032360910138896 0.0 30 2.6746764310187575E-4 0.0 0.0 13.514605070651578 0.0 31 2.6746764310187575E-4 0.0 0.0 13.916876405876799 0.0 32 2.6746764310187575E-4 0.0 0.0 14.318345338172714 0.0 33 2.6746764310187575E-4 0.0 0.0 14.729175637977196 0.0 34 2.6746764310187575E-4 0.0 0.0 15.12609762034038 0.0 35 2.6746764310187575E-4 0.0 0.0 15.564744555027456 0.0 36 2.6746764310187575E-4 0.0 0.0 15.95177023459587 0.0 37 2.6746764310187575E-4 0.0 0.0 16.344947669955626 0.0 38 2.6746764310187575E-4 0.0 0.0 16.756580372689413 0.0 39 2.6746764310187575E-4 0.0 0.0 17.262629153438162 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTCGT 20 7.027173E-4 45.000004 21 CGAAAAG 20 7.027173E-4 45.000004 2 ACCTATC 20 7.027173E-4 45.000004 3 TATACGG 20 7.027173E-4 45.000004 2 CGTTTAG 20 7.027173E-4 45.000004 2 AACACGG 20 7.027173E-4 45.000004 2 CACGGGT 25 3.8857394E-5 45.0 4 ATAACGG 25 3.8857394E-5 45.0 2 TAAGGCG 30 2.1615579E-6 44.999996 5 CGTTATT 75 0.0 42.0 1 CGTTTTA 230 0.0 41.086956 1 AAGGCGA 110 0.0 40.909092 6 ACAACGA 50 1.0768417E-9 40.5 13 CACAACG 50 1.0768417E-9 40.5 12 CGTTTTT 460 0.0 40.108692 1 GTAGCAA 45 1.922308E-8 40.0 1 AGGCGAT 245 0.0 39.489796 7 AGGTACC 40 3.449877E-7 39.375004 7 TTAATCG 35 6.2369872E-6 38.571426 20 CATACGA 70 0.0 38.571426 18 >>END_MODULE