SRR2934703.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934703.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	366578
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1333	0.363633387710119	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	788	0.21496107240478154	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTACAG	25	3.885589E-5	45.000004	2
AGCGTAA	20	7.026994E-4	45.0	1
CGCGAAG	20	7.026994E-4	45.0	2
TCGATAG	20	7.026994E-4	45.0	2
TTCATCG	40	6.7939254E-9	45.0	15
CGTCATA	20	7.026994E-4	45.0	38
TATAACG	20	7.026994E-4	45.0	1
AATACCG	20	7.026994E-4	45.0	21
CAGACGA	20	7.026994E-4	45.0	2
ACGGGTC	30	2.1614414E-6	44.999996	5
GCGATCA	30	2.1614414E-6	44.999996	9
CGTTTTA	310	0.0	43.54839	1
CGCAGGA	70	0.0	41.785713	4
TACGAAT	65	0.0	41.538464	12
CGAATAT	65	0.0	41.538464	14
GCTACGA	65	0.0	41.538464	10
GTATAAG	55	6.002665E-11	40.909092	2
CACAACG	105	0.0	40.714287	12
TCGAAAG	50	1.0768417E-9	40.500004	2
TACGGGA	130	0.0	39.807693	4