SRR2934702.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934702.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	436127
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4250	0.9744867893985009	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2435	0.5583236075730235	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	936	0.2146163846769404	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGTAAG	25	3.88681E-5	45.000004	2
TAGCACG	20	7.028468E-4	45.0	1
GCGTATA	20	7.028468E-4	45.0	1
CGAAGCT	20	7.028468E-4	45.0	39
CGTTTTA	790	0.0	44.14557	1
CGTTATT	385	0.0	43.24675	1
AGGCGAT	235	0.0	43.085106	7
TCAAGCG	265	0.0	42.45283	17
CGTTTTT	1530	0.0	41.911762	1
CGACCAA	275	0.0	41.727272	29
ACACGTG	245	0.0	41.32653	42
TACGAAT	60	3.6379788E-12	41.249996	12
ACGACCA	280	0.0	40.98214	28
AAACACG	275	0.0	40.909092	40
TTACACG	450	0.0	40.5	34
CGAGACA	285	0.0	40.263157	22
CGAAGGA	95	0.0	40.263157	4
TACACGC	460	0.0	40.108692	35
AGTACGG	45	1.9235813E-8	40.0	2
AACACGT	260	0.0	39.807693	41