SRR2934700.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934700.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	674150
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8515	1.2630720166135134	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4941	0.7329229399985167	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	802	0.1189646221167396	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCTAC	20	7.031208E-4	45.000004	38
CGTTTTA	1930	0.0	44.067356	1
CGTTATT	770	0.0	42.954548	1
CGTTTTT	3240	0.0	42.430553	1
CACGACG	45	1.9263098E-8	40.0	26
CGGTCTA	45	1.9263098E-8	40.0	31
AGGCGAT	345	0.0	39.782608	7
GTTTTAT	2230	0.0	39.450672	2
AACACGT	155	0.0	39.193546	41
AAACACG	175	0.0	38.571426	40
AGCGTAA	30	1.13942115E-4	37.500004	1
ACTCGTT	30	1.13942115E-4	37.500004	45
GCGTATG	30	1.13942115E-4	37.500004	1
TAATCGT	60	1.546141E-10	37.500004	21
CACGACC	180	0.0	37.5	27
TCAAGCG	180	0.0	36.25	17
TCACGAC	50	4.8738002E-8	36.000004	25
TACGGGT	50	4.8738002E-8	36.000004	4
GTTACGA	25	0.0021064915	36.000004	1
ACACGAC	190	0.0	35.526314	26