##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934699.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 254293 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.661846767311722 31.0 31.0 34.0 30.0 34.0 2 31.851498075055154 31.0 31.0 34.0 30.0 34.0 3 31.619777186159272 31.0 31.0 34.0 30.0 34.0 4 35.48490520777214 37.0 35.0 37.0 33.0 37.0 5 31.872281187449122 37.0 35.0 37.0 0.0 37.0 6 33.781999504508576 37.0 35.0 37.0 19.0 37.0 7 20.905777980518536 32.0 0.0 37.0 0.0 37.0 8 28.163724522499635 35.0 17.0 37.0 17.0 37.0 9 34.751546444455805 37.0 32.0 39.0 30.0 39.0 10 35.99646864050524 37.0 35.0 39.0 32.0 39.0 11 36.44494736386766 37.0 35.0 39.0 32.0 39.0 12 36.86664988812118 39.0 35.0 39.0 33.0 39.0 13 36.62151533860547 39.0 35.0 39.0 32.0 39.0 14 37.927339722288856 40.0 37.0 41.0 33.0 41.0 15 38.12313748313953 40.0 37.0 41.0 33.0 41.0 16 38.1974808586945 40.0 37.0 41.0 34.0 41.0 17 38.1838351822504 40.0 37.0 41.0 34.0 41.0 18 38.07208220438628 40.0 37.0 41.0 33.0 41.0 19 38.00770371185994 40.0 37.0 41.0 34.0 41.0 20 37.963243187976076 40.0 36.0 41.0 34.0 41.0 21 37.85834450810679 39.0 36.0 41.0 33.0 41.0 22 37.84247698520998 39.0 36.0 41.0 33.0 41.0 23 37.77536149245162 39.0 36.0 41.0 33.0 41.0 24 37.642616981198856 39.0 36.0 41.0 33.0 41.0 25 37.52048227831674 39.0 35.0 41.0 33.0 41.0 26 37.38127278375732 39.0 35.0 41.0 33.0 41.0 27 37.35644709056089 39.0 35.0 41.0 33.0 41.0 28 37.29385394013992 39.0 35.0 41.0 33.0 41.0 29 37.29190343422744 39.0 35.0 41.0 33.0 41.0 30 37.142162780729315 39.0 35.0 40.0 32.0 41.0 31 36.959747220725696 39.0 35.0 40.0 31.0 41.0 32 36.850766635337976 39.0 35.0 40.0 31.0 41.0 33 36.69006618349699 39.0 35.0 40.0 31.0 41.0 34 36.475471208409196 39.0 35.0 40.0 30.0 41.0 35 36.31345337858297 39.0 35.0 40.0 30.0 41.0 36 36.09082043154943 39.0 35.0 40.0 29.0 41.0 37 35.93984498196962 39.0 35.0 40.0 29.0 41.0 38 35.84580778865325 39.0 35.0 40.0 28.0 41.0 39 35.76955323190178 39.0 35.0 40.0 27.0 41.0 40 35.6525543369263 39.0 35.0 40.0 26.0 41.0 41 35.57230438903155 39.0 35.0 40.0 26.0 41.0 42 35.43958740507997 38.0 35.0 40.0 25.0 41.0 43 35.27288600158085 38.0 35.0 40.0 24.0 41.0 44 35.070060913985046 38.0 34.0 40.0 24.0 41.0 45 34.92820486604035 38.0 34.0 40.0 23.0 41.0 46 34.691627374721286 38.0 34.0 40.0 23.0 41.0 47 34.62028447499538 38.0 34.0 40.0 23.0 41.0 48 34.505570346018175 38.0 34.0 40.0 22.0 41.0 49 34.354185919392194 38.0 33.0 40.0 22.0 41.0 50 34.10975921476407 38.0 33.0 40.0 20.0 41.0 51 32.055872556460464 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 6.0 10 8.0 11 4.0 12 5.0 13 5.0 14 2.0 15 11.0 16 13.0 17 22.0 18 60.0 19 150.0 20 286.0 21 464.0 22 843.0 23 1372.0 24 2144.0 25 3009.0 26 3653.0 27 4283.0 28 4347.0 29 5167.0 30 6118.0 31 7487.0 32 9961.0 33 13724.0 34 18722.0 35 24515.0 36 29353.0 37 45437.0 38 44874.0 39 28244.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.76591176320229 19.45393699394006 23.407250691131885 18.372900551725767 2 31.33550667930301 24.680191747315106 25.738813101422377 18.24548847195951 3 30.008690762230973 23.3899478161019 30.516766092656894 16.084595329010238 4 25.923639266515398 25.720723732072848 29.153771436885794 19.20186556452596 5 20.89440134018632 36.30536428450645 26.005827922907827 16.794406452399397 6 23.807969546939947 34.86254045530156 28.128182844199408 13.201307153559084 7 47.6458258780226 42.216655590205 7.305745734251435 2.8317727975209697 8 80.49336788665043 4.282068322761539 10.962551072974875 4.262012717613147 9 75.22936140593724 6.77997428163575 13.048727255567396 4.941937056859607 10 35.782345562009176 29.783753386841163 20.761877047343024 13.672024003806632 11 26.804906151565323 25.534324578340733 29.868694773352 17.792074496741947 12 25.295230305199123 23.769431325282252 32.69220938051775 18.243128989000876 13 20.842099467936592 28.281155989350864 33.55342066041928 17.32332388229326 14 17.467252342769953 29.996106853118253 32.942314574132986 19.594326229978805 15 16.754295242102614 26.832040205589614 38.21811846963935 18.195546082668418 16 19.009960950557033 26.765581435588082 35.09141030228909 19.133047311565793 17 19.630898215837636 25.879988831780665 31.12590594314433 23.363207009237374 18 20.447672566684886 25.39354209514222 34.352105641917 19.806679696255895 19 20.682441121069004 27.566232652884665 31.371292170842295 20.380034055204035 20 21.899541080564546 26.891027279555473 32.6473792043037 18.562052435576284 21 19.995045085786867 28.422331719709153 33.10865812271671 18.47396507178727 22 19.77836590075228 26.014479360422822 31.35320280149277 22.85395193733213 23 17.583260254902807 28.154137156744387 32.035486623697864 22.227115964654946 24 18.009146928936307 25.697128902486497 35.417805444900175 20.875918723677017 25 17.044118398854867 28.035769761652894 32.866417872296914 22.053693967195322 26 17.715784547746104 29.84077422500816 31.51640037279831 20.92704085444743 27 19.194000621330513 28.681874845158934 32.092507461864855 20.031617071645698 28 16.461719355231956 27.963805531414547 34.71192679310874 20.862548320244755 29 17.706739863071338 25.980660104682396 33.56836405249063 22.744235979755636 30 19.585674792463813 27.589040988151464 32.06851938511874 20.756764834265983 31 20.14880472525787 28.213517477870013 30.62294282579544 21.01473497107667 32 19.858195074186078 27.86077477555418 30.310704580936164 21.970325569323577 33 19.998977557384592 26.57564305741802 28.992146854219346 24.433232530978046 34 16.449528693279014 27.0487193906242 32.18570703873092 24.316044877365872 35 17.54708151620375 26.87411765168526 30.01183673950915 25.56696409260184 36 21.109507536581816 27.06838174861282 29.484885545414148 22.337225169391214 37 17.80229892289603 28.19424836704117 31.39606674190796 22.607385968154844 38 16.267062011144624 28.315368492251064 29.714935133880992 25.702634362723316 39 18.139311738820965 27.563086675606485 29.593028514351555 24.70457307122099 40 19.936058011821007 26.628338176827516 29.4243254828092 24.01127832854227 41 17.159733063827947 26.341267750193676 29.062538095818603 27.436461090159774 42 19.057937104049266 25.629883638165424 30.060599387320924 25.251579870464386 43 19.689885289803495 25.656624445029948 30.766871286272135 23.886618978894425 44 19.21169674352027 26.769120660026037 29.581231099558387 24.437951496895312 45 19.247088987899787 27.126975575418903 28.384973239530776 25.24096219715053 46 20.04459422791819 27.673195880342753 28.267392338758835 24.014817552980226 47 17.991057559586775 27.117144396424596 30.787713385740073 24.104084658248556 48 18.394135898353476 25.72583594514989 30.80226353065165 25.07776462584499 49 19.400455380211014 24.216160098783686 31.421627807293163 24.961756713712134 50 18.37840601196258 25.810777331660724 30.648503891180646 25.162312765196056 51 17.602136118571885 25.5091567601153 28.064870051476053 28.82383706983676 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 235.0 1 457.0 2 679.0 3 2503.0 4 4327.0 5 2997.0 6 1667.0 7 1483.5 8 1300.0 9 1304.0 10 1308.0 11 1331.0 12 1354.0 13 1325.0 14 1296.0 15 1304.0 16 1312.0 17 1263.0 18 1214.0 19 1220.0 20 1226.0 21 1273.5 22 1321.0 23 1403.5 24 1486.0 25 1760.5 26 2447.0 27 2859.0 28 3455.5 29 4052.0 30 4650.5 31 5249.0 32 6153.0 33 7057.0 34 7892.0 35 8727.0 36 9259.0 37 9791.0 38 10949.5 39 12108.0 40 13593.5 41 15079.0 42 16170.5 43 17262.0 44 18054.5 45 18847.0 46 20187.0 47 21527.0 48 23236.5 49 24946.0 50 25080.0 51 25214.0 52 23226.0 53 21238.0 54 17730.5 55 14223.0 56 11635.5 57 9048.0 58 7423.0 59 5798.0 60 4841.0 61 3884.0 62 3256.5 63 2629.0 64 2150.0 65 1671.0 66 1295.5 67 920.0 68 726.0 69 532.0 70 457.0 71 382.0 72 312.5 73 243.0 74 188.5 75 95.0 76 56.0 77 43.0 78 30.0 79 22.5 80 15.0 81 9.0 82 3.0 83 3.0 84 3.0 85 2.5 86 2.0 87 3.0 88 4.0 89 2.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 254293.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.81256608278182 #Duplication Level Percentage of deduplicated Percentage of total 1 77.11417008935946 40.725972037631735 2 8.812945077403528 9.30868488568601 3 3.809916176733679 6.0363434956082065 4 2.3256296402849994 4.9128987624651055 5 1.6589557992343449 4.380685638773898 6 1.3151522882631834 4.167394027969266 7 1.0557961692664306 3.903151347153188 8 0.8255893730053038 3.4881194655268013 9 0.635259710844628 3.0194725912839706 >10 2.424861606318317 17.767813144579065 >50 0.011985693399255025 0.43597546100945117 >100 0.00824016421198783 0.8715553000034673 >500 7.491058374534391E-4 0.33825682319698797 >1k 7.491058374534391E-4 0.6436770191128648 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1627 0.6398131289496761 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 855 0.33622632160539223 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 330 0.1297715627248882 No Hit CCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 281 0.11050245189604117 RNA PCR Primer, Index 16 (96% over 25bp) GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 258 0.10145776722127625 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1407824831985151 0.0 2 0.0 0.0 0.0 0.6303751971151388 0.0 3 0.0 0.0 0.0 0.8159878565277062 0.0 4 0.0 0.0 0.0 1.0448577035152364 0.0 5 0.0 0.0 0.0 1.6992209773764908 0.0 6 0.0 0.0 0.0 2.2328573731876222 0.0 7 0.0 0.0 0.0 2.774751959353974 0.0 8 0.0 0.0 0.0 4.100388134946695 0.0 9 0.0 0.0 0.0 4.548689897087218 0.0 10 0.0 0.0 0.0 5.7068027826169025 0.0 11 0.0 0.0 0.0 7.323441856441192 0.0 12 0.0 0.0 0.0 8.56452989268285 0.0 13 0.0 0.0 0.0 9.05333611227993 0.0 14 0.0 0.0 0.0 9.25428541092362 0.0 15 0.0 0.0 0.0 9.630622942825795 0.0 16 0.0 0.0 0.0 10.44818378799259 0.0 17 0.0 0.0 0.0 11.454503269850134 0.0 18 0.0 0.0 0.0 12.55677505869214 0.0 19 0.0 0.0 0.0 13.18282453704978 0.0 20 0.0 0.0 0.0 13.773481771027908 0.0 21 0.0 0.0 0.0 14.5540773831761 0.0 22 0.0 0.0 0.0 15.393266822130377 0.0 23 0.0 0.0 0.0 16.260770056588267 0.0 24 0.0 0.0 0.0 16.945413361751996 0.0 25 0.0 0.0 0.0 17.538430078688755 0.0 26 0.0 0.0 0.0 18.096447798405777 0.0 27 0.0 0.0 0.0 18.64699382208712 0.0 28 0.0 0.0 0.0 19.228999618550255 0.0 29 0.0 0.0 0.0 19.815331133770886 0.0 30 0.0 0.0 0.0 20.50744613497029 0.0 31 0.0 0.0 0.0 21.142147050842926 0.0 32 0.0 0.0 0.0 21.6993782762404 0.0 33 0.0 0.0 0.0 22.237733637968798 0.0 34 0.0 0.0 0.0 22.783167448573103 0.0 35 0.0 0.0 0.0 23.397812759297345 0.0 36 0.0 0.0 0.0 23.956223726174137 0.0 37 0.0 0.0 0.0 24.48986012198527 0.0 38 0.0 0.0 0.0 25.03018171951253 0.0 39 0.0 0.0 0.0 25.575615530116835 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGAAG 35 1.2069358E-7 45.000004 2 ACGGGAC 35 1.2069358E-7 45.000004 5 TAAGGCG 30 2.1588112E-6 45.000004 5 TCACGGC 20 7.0229155E-4 45.0 35 CGGGTCA 25 3.88221E-5 45.0 6 GTCGAGG 25 3.88221E-5 45.0 3 ATAGGCG 20 7.0229155E-4 45.0 5 TTTACGG 20 7.0229155E-4 45.0 2 ACGCACG 20 7.0229155E-4 45.0 1 CGCGCAA 20 7.0229155E-4 45.0 18 TCGGCGG 20 7.0229155E-4 45.0 15 ATCGTCC 20 7.0229155E-4 45.0 39 AACGGGT 20 7.0229155E-4 45.0 4 CCATCGT 20 7.0229155E-4 45.0 37 CTACGAA 40 6.7793735E-9 45.0 11 TACGAAT 40 6.7793735E-9 45.0 12 CAAGGCG 25 3.88221E-5 45.0 5 CGGGCTA 20 7.0229155E-4 45.0 6 AACGCGG 20 7.0229155E-4 45.0 2 TCGTCCT 20 7.0229155E-4 45.0 40 >>END_MODULE