SRR2934698.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934698.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	188051
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	835	0.44402848163530106	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	478	0.25418636433733405	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	281	0.14942754890960433	No Hit
GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	236	0.12549787025860007	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	199	0.10582235670110768	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAGGAT	45	3.8198777E-10	45.0	5
TCGCAGT	20	7.018229E-4	45.0	42
CAAACGG	25	3.8783295E-5	45.0	2
ATGATCG	25	3.8783295E-5	45.0	28
GATCGTG	20	7.018229E-4	45.0	30
TGGACGG	25	3.8783295E-5	45.0	2
CGTGATG	20	7.018229E-4	45.0	28
CGTGAGT	20	7.018229E-4	45.0	33
GAATCGA	20	7.018229E-4	45.0	34
GCAAACG	20	7.018229E-4	45.0	1
CTAACGG	20	7.018229E-4	45.0	2
CGGGCAT	20	7.018229E-4	45.0	6
GCAGGTA	25	3.8783295E-5	45.0	25
ACCGTGA	20	7.018229E-4	45.0	26
TCAAGCG	25	3.8783295E-5	45.0	17
TGGTCAA	25	3.8783295E-5	45.0	14
GAAGGTA	20	7.018229E-4	45.0	5
TACCGGG	25	3.8783295E-5	45.0	3
AACACGT	25	3.8783295E-5	45.0	41
CTAAAGC	30	2.1557935E-6	44.999996	5