SRR2934696.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934696.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	407481
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1685	0.41351621302588343	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	936	0.2297039616571079	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGAACT	20	7.027919E-4	45.000004	41
CGTTTAG	20	7.027919E-4	45.000004	2
GCGCGAA	25	3.886358E-5	45.0	1
TACCGGG	25	3.886358E-5	45.0	3
CGTTATT	155	0.0	42.09677	1
CGTTTTA	220	0.0	41.93182	1
GCGATGT	70	0.0	41.785717	9
AGGCGAT	220	0.0	40.909092	7
TACGGGA	100	0.0	40.5	4
AGGATCG	45	1.9230356E-8	40.0	7
ACACGCT	40	3.4508957E-7	39.375004	14
TCGATCA	40	3.4508957E-7	39.375004	17
ACTAGGC	40	3.4508957E-7	39.375004	4
TGACACG	40	3.4508957E-7	39.375004	12
CTCGATC	40	3.4508957E-7	39.375004	16
CTTACGG	40	3.4508957E-7	39.375004	2
ATAGGGT	75	0.0	39.0	5
AGGATCA	145	0.0	38.793106	7
CGCATAG	35	6.238364E-6	38.57143	2
CGTTAGG	35	6.238364E-6	38.57143	3