SRR2934693.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934693.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	292378
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	983	0.33620860666671226	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	583	0.1993994076161681	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTTGAC	20	7.0246484E-4	45.000004	24
TCGTTTA	20	7.0246484E-4	45.000004	8
TACGGGT	20	7.0246484E-4	45.000004	4
CGGGCTT	20	7.0246484E-4	45.000004	6
CGTAAAG	20	7.0246484E-4	45.000004	2
GCCACGT	20	7.0246484E-4	45.000004	32
CGGGTAT	30	2.1599299E-6	44.999996	6
TTTACGG	30	2.1599299E-6	44.999996	2
GTAAGGC	30	2.1599299E-6	44.999996	4
AGGCGAT	140	0.0	43.392857	7
TATGGGA	90	0.0	42.5	4
ACGGGAA	80	0.0	42.187504	5
TTACGGG	80	0.0	42.187504	3
CGGTAGT	80	0.0	42.187504	12
TAACGGG	75	0.0	42.0	3
CACGGGA	125	0.0	41.4	4
CACGACC	120	0.0	41.249996	27
CTACGGG	50	1.0750227E-9	40.500004	3
GCGATGT	50	1.0750227E-9	40.500004	9
TTAATCG	45	1.9199433E-8	40.0	20