##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934692.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 313505 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02269501283871 33.0 31.0 34.0 30.0 34.0 2 32.212529305752696 33.0 31.0 34.0 30.0 34.0 3 31.959834771375256 33.0 31.0 34.0 30.0 34.0 4 35.79238608634631 37.0 35.0 37.0 35.0 37.0 5 32.09056952839668 37.0 35.0 37.0 0.0 37.0 6 33.97758887418063 37.0 35.0 37.0 19.0 37.0 7 20.617792379706863 32.0 0.0 37.0 0.0 37.0 8 28.045026395113315 35.0 17.0 37.0 17.0 37.0 9 34.907931292961834 37.0 32.0 39.0 32.0 39.0 10 36.3086075182214 37.0 35.0 39.0 32.0 39.0 11 36.72144303918598 38.0 37.0 39.0 33.0 39.0 12 37.08097478509114 39.0 37.0 39.0 34.0 39.0 13 36.879057750275116 39.0 37.0 39.0 33.0 39.0 14 38.20156935296088 40.0 38.0 41.0 33.0 41.0 15 38.3680962026124 40.0 38.0 41.0 34.0 41.0 16 38.467160013396914 40.0 38.0 41.0 34.0 41.0 17 38.4399802236009 40.0 38.0 41.0 34.0 41.0 18 38.33152262324365 40.0 38.0 41.0 34.0 41.0 19 38.268805920160766 40.0 37.0 41.0 34.0 41.0 20 38.2169821852921 40.0 37.0 41.0 34.0 41.0 21 38.10397601314174 40.0 37.0 41.0 34.0 41.0 22 38.07876748377219 40.0 37.0 41.0 34.0 41.0 23 38.010940814341076 40.0 36.0 41.0 34.0 41.0 24 37.888792842219424 40.0 36.0 41.0 33.0 41.0 25 37.74826557790147 40.0 36.0 41.0 33.0 41.0 26 37.61864723050669 40.0 36.0 41.0 33.0 41.0 27 37.579496339771296 40.0 36.0 41.0 33.0 41.0 28 37.492878901452926 40.0 35.0 41.0 33.0 41.0 29 37.453437744214604 40.0 35.0 41.0 33.0 41.0 30 37.28536386979474 39.0 35.0 41.0 33.0 41.0 31 37.14797212165675 39.0 35.0 41.0 32.0 41.0 32 37.0065804373136 39.0 35.0 41.0 32.0 41.0 33 36.83770593770434 39.0 35.0 41.0 31.0 41.0 34 36.610143378893476 39.0 35.0 41.0 30.0 41.0 35 36.40961388175627 39.0 35.0 41.0 30.0 41.0 36 36.22878741965838 39.0 35.0 41.0 30.0 41.0 37 36.171722939028086 39.0 35.0 41.0 29.0 41.0 38 35.992185132613514 39.0 35.0 41.0 29.0 41.0 39 35.886132597566224 39.0 35.0 40.0 28.0 41.0 40 35.775700547040714 39.0 35.0 40.0 27.0 41.0 41 35.63999936205164 39.0 35.0 40.0 26.0 41.0 42 35.539905264668825 39.0 35.0 40.0 26.0 41.0 43 35.47426994784772 38.0 35.0 40.0 26.0 41.0 44 35.311768552335685 38.0 34.0 40.0 25.0 41.0 45 35.1832506658586 38.0 34.0 40.0 25.0 41.0 46 35.067319500486434 38.0 34.0 40.0 24.0 41.0 47 35.0084751439371 38.0 34.0 40.0 24.0 41.0 48 34.882633450822155 38.0 34.0 40.0 24.0 41.0 49 34.76963365815537 38.0 34.0 40.0 24.0 41.0 50 34.61456755075677 38.0 34.0 40.0 24.0 41.0 51 32.887446771183875 36.0 31.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 18.0 10 17.0 11 14.0 12 19.0 13 10.0 14 9.0 15 16.0 16 41.0 17 44.0 18 124.0 19 222.0 20 352.0 21 608.0 22 1029.0 23 1661.0 24 2643.0 25 3534.0 26 4162.0 27 4639.0 28 4972.0 29 5293.0 30 6249.0 31 7981.0 32 10598.0 33 15589.0 34 21450.0 35 27707.0 36 36347.0 37 59634.0 38 59904.0 39 38609.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.668203058962376 18.123793878885504 21.014337889347857 17.193665172804263 2 33.77043428334476 23.791008117892858 25.031817674359257 17.40673992440312 3 31.22725315385719 23.912537280107173 28.597311047670694 16.26289851836494 4 27.468461428047398 25.31283392609368 28.45887625396724 18.759828391891674 5 22.08322036331159 36.2252595652382 24.98779923765171 16.703720833798506 6 26.43562303631521 33.617326677405465 26.830194095787945 13.11685619049138 7 48.71979713242213 43.176344874882375 5.954291000143538 2.1495669925519527 8 85.31698059042121 3.7007384252244777 8.8282483532958 2.1540326310585156 9 79.64785250633962 6.036267364156871 10.554855584440439 3.761024545063077 10 40.69568268448669 28.997942616545192 17.672126441364572 12.634248257603547 11 30.358686464330713 25.69145627661441 27.050605253504727 16.89925200555015 12 27.092071896779956 23.863734230714023 29.95167541187541 19.09251846063061 13 24.186217125723672 25.119216599416276 32.06073268368926 18.633833591170795 14 21.336501810178465 25.820321844946655 32.41702684167716 20.426149503197717 15 20.514186376612813 25.599910687229873 33.99148338941963 19.89441954673769 16 25.328782635045695 25.536115851421826 31.233951611617037 17.90114990191544 17 25.352067750115626 24.515398478493168 30.110524553037433 20.022009218353773 18 25.69305114750961 23.895312674439005 30.82375081737133 19.58788536068005 19 25.07200842091833 25.618092215435162 28.959984689239405 20.349914674407106 20 26.44359739079122 26.240410838742605 29.170188673226903 18.14580309723928 21 25.977576115213473 25.764820337793655 29.813559592350998 18.444043954641874 22 25.895599751200137 23.505207253472832 30.436516164016524 20.162676831310506 23 23.623865648075785 26.205642653227223 30.525828934147782 19.64466276454921 24 22.60346724932617 24.864356230363153 32.417983764214284 20.114192756096394 25 23.110636194000094 26.271032359930462 30.4974402322132 20.120891213856236 26 22.74509178482002 26.936093523229292 29.622813033284956 20.69600165866573 27 21.917672764389724 26.302610803655448 30.869364124974087 20.91035230698075 28 20.149917864148897 27.396054289405274 31.24990032056905 21.204127525876782 29 22.06918549943382 26.046474537886162 30.736351892314318 21.147988070365702 30 22.539991387697167 25.47774357665747 30.900304620340986 21.081960415304383 31 23.515095453023076 25.593850177828102 30.199518348989653 20.69153602015917 32 23.875855249517553 25.145691456276616 30.07575636752205 20.902696926683785 33 22.677469258863496 25.242021658346758 29.997607693657198 22.08290138913255 34 21.402529465239787 26.15173601696943 31.888167652828503 20.557566864962283 35 21.998692205865936 27.288878965247765 30.331573659112294 20.380855169774005 36 23.305848391572702 28.41740961069201 27.976268321079406 20.300473676655876 37 22.52850831725172 27.83528173394364 28.31820864101051 21.318001307794134 38 21.85292100604456 28.40528859188849 29.654391477009934 20.087398925057016 39 22.679064129758697 27.254748728090462 28.266534824005994 21.799652318144847 40 24.562606656991118 26.35875025916652 28.74116840241782 20.33747468142454 41 21.520868885663706 26.474218911979076 28.989330313711104 23.015581888646114 42 22.36678840847833 26.398303057367507 28.84387808806877 22.391030446085388 43 21.737133379052967 26.228927768297154 29.29107988708314 22.742858965566736 44 22.010494250490424 26.96703401859619 29.024098499226486 21.998373231686898 45 21.768073874419866 26.56385065628937 28.117892856573263 23.550182612717503 46 21.814963078738774 27.049648330967607 28.729047383614297 22.40634120667932 47 21.11194398813416 27.21998054257508 30.08596354125134 21.582111928039424 48 21.844627677389518 27.673242850991215 29.205913781279406 21.276215690339868 49 22.51255960829971 27.102917018867323 29.055676942951468 21.3288464298815 50 21.753401062184015 27.552989585493055 29.492033619878473 21.201575732444457 51 22.137445973748427 26.972137605460837 27.754581266646465 23.13583515414427 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 138.0 1 388.0 2 638.0 3 3050.5 4 5463.0 5 3690.5 6 1918.0 7 1683.0 8 1448.0 9 1404.5 10 1361.0 11 1363.5 12 1366.0 13 1366.5 14 1367.0 15 1372.0 16 1377.0 17 1376.5 18 1376.0 19 1404.5 20 1433.0 21 1524.0 22 1615.0 23 1790.5 24 1966.0 25 2277.5 26 3188.0 27 3787.0 28 4549.5 29 5312.0 30 6005.0 31 6698.0 32 7511.0 33 8324.0 34 9354.0 35 10384.0 36 11198.0 37 12012.0 38 13051.0 39 14090.0 40 15092.0 41 16094.0 42 17065.5 43 18037.0 44 19339.5 45 20642.0 46 20673.0 47 20704.0 48 20889.0 49 21074.0 50 20623.5 51 20173.0 52 19513.0 53 18853.0 54 18414.0 55 17975.0 56 17223.0 57 16471.0 58 15184.5 59 13898.0 60 13049.0 61 12200.0 62 11069.5 63 9939.0 64 8761.0 65 7583.0 66 6471.5 67 5360.0 68 4455.5 69 3551.0 70 2975.5 71 2400.0 72 1987.0 73 1574.0 74 1310.0 75 844.0 76 642.0 77 480.0 78 318.0 79 238.0 80 158.0 81 118.5 82 79.0 83 57.0 84 35.0 85 26.0 86 17.0 87 12.5 88 8.0 89 5.0 90 2.0 91 3.5 92 5.0 93 3.5 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 313505.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.471759939781414 #Duplication Level Percentage of deduplicated Percentage of total 1 66.78486401600223 31.70395032178604 2 11.26182763640421 10.69237556077153 3 6.4644568905777025 9.206374369517114 4 4.485116365636305 8.516654696458863 5 3.2747582926946364 7.772926976580413 6 2.3928308172554944 6.815513407995829 7 1.6424514486749962 5.457904261897194 8 1.1718327260203232 4.4503169487373135 9 0.8029295897674297 3.4304832660587934 >10 1.700538984707565 10.111781260379445 >50 0.01089969319060228 0.3573484490690647 >100 0.006131077419713783 0.4886457072790559 >500 0.0 0.0 >1k 0.001362461648825285 0.9957247734693666 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1951 0.6223186233074433 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1128 0.35980287395735316 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 460 0.14672812235849508 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.012758967161608268 0.0 2 0.0 0.0 0.0 0.04912202357219183 0.0 3 0.0 0.0 0.0 0.07527790625348878 0.0 4 0.0 0.0 0.0 0.10143378893478573 0.0 5 0.0 0.0 0.0 0.2057383454809333 0.0 6 0.0 0.0 0.0 0.3486387776909459 0.0 7 0.0 0.0 0.0 0.46346948214542033 0.0 8 0.0 0.0 0.0 0.7310888183601537 0.0 9 0.0 0.0 0.0 0.8727133538540055 0.0 10 0.0 0.0 0.0 1.1195993684311254 0.0 11 0.0 0.0 0.0 1.3674423055453662 0.0 12 0.0 0.0 0.0 1.5687150125197364 0.0 13 0.0 0.0 0.0 1.6720626465287636 0.0 14 0.0 0.0 0.0 1.7479785011403326 0.0 15 0.0 0.0 0.0 1.8267651233632638 0.0 16 0.0 0.0 0.0 1.9578635109487887 0.0 17 0.0 0.0 0.0 2.095660356294158 0.0 18 0.0 0.0 0.0 2.2535525749190604 0.0 19 0.0 0.0 0.0 2.3581761056442483 0.0 20 0.0 0.0 0.0 2.482895009648969 0.0 21 0.0 0.0 0.0 2.642382099169072 0.0 22 0.0 0.0 0.0 2.791980989138929 0.0 23 0.0 0.0 0.0 2.951787052838073 0.0 24 0.0 0.0 0.0 3.0825664662445575 0.0 25 0.0 0.0 0.0 3.2056904993540773 0.0 26 0.0 0.0 0.0 3.323710945598954 0.0 27 0.0 0.0 0.0 3.4650165069137655 0.0 28 0.0 0.0 0.0 3.601537455542974 0.0 29 0.0 0.0 0.0 3.7667660802858007 0.0 30 0.0 0.0 0.0 4.025773113666449 0.0 31 0.0 0.0 0.0 4.209502240793608 0.0 32 0.0 0.0 0.0 4.417473405527822 0.0 33 0.0 0.0 0.0 4.610452783847148 0.0 34 0.0 0.0 0.0 4.779190124559417 0.0 35 0.0 0.0 0.0 4.992902824516356 0.0 36 0.0 0.0 0.0 5.177907848359675 0.0 37 0.0 0.0 0.0 5.350153905041387 0.0 38 0.0 0.0 0.0 5.557487121417521 0.0 39 0.0 0.0 0.0 5.923988453134719 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTAGGC 25 3.8842936E-5 45.000004 4 GCGATCT 40 6.7884685E-9 45.000004 9 TAGGCCG 20 7.0254295E-4 45.000004 6 AGTACGG 20 7.0254295E-4 45.000004 2 CGAAGGA 45 3.8198777E-10 45.000004 4 CGAATAT 30 2.1604337E-6 44.999996 14 CGTTTAG 30 2.1604337E-6 44.999996 2 GACCGAT 145 0.0 43.448273 9 CGTTATT 140 0.0 43.392857 1 CGTTTTA 480 0.0 43.124996 1 AGGCGAT 145 0.0 41.89655 7 GCCGATG 45 1.920671E-8 40.000004 9 CGTTTTT 770 0.0 39.44805 1 GTAGGAC 40 3.4474942E-7 39.375004 5 ACACGAC 190 0.0 39.07895 26 TACGAAT 35 6.233762E-6 38.571426 12 TAAGGTC 35 6.233762E-6 38.571426 5 GCTACGA 35 6.233762E-6 38.571426 10 CACGACC 200 0.0 38.250004 27 ACGACCA 200 0.0 38.250004 28 >>END_MODULE