SRR2934691.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934691.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	400913
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1062	0.26489537630358706	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	621	0.15489644885548737	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGGGT	60	0.0	45.000004	4
TATGCGG	30	2.1619526E-6	45.000004	2
ACTAGGT	30	2.1619526E-6	45.000004	4
CTATCGT	20	7.027785E-4	45.0	33
CATTCGA	25	3.8862454E-5	45.0	15
TCGTGCG	20	7.027785E-4	45.0	45
ATACCGG	25	3.8862454E-5	45.0	2
AGGCGAT	140	0.0	41.785713	7
CGTTTTA	245	0.0	41.32653	1
TATGGGC	100	0.0	40.5	4
CGCACGG	40	3.4507138E-7	39.375	2
GTACGGG	160	0.0	39.375	3
CGTTTTT	425	0.0	38.647057	1
CAATTAG	70	0.0	38.571426	2
TAGGCAC	35	6.238117E-6	38.571426	6
CGCATAG	65	9.094947E-12	38.07692	2
AACGTTC	30	1.138596E-4	37.500004	40
CGAACGT	30	1.138596E-4	37.500004	38
AACGGGC	30	1.138596E-4	37.500004	4
CTGCACG	30	1.138596E-4	37.500004	1