SRR2934689.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934689.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	328388
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2082	0.6340061147179556	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1187	0.3614626600241178	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCG	619	0.18849653458713472	No Hit
GAATCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCGTCTTC	475	0.14464596757494183	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGC	436	0.13276977234247292	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	435	0.13246525451599936	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAAAGGTCCTCGTATGCCG	392	0.1193709879776362	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCAATT	25	3.8847003E-5	45.0	8
CGATTCA	20	7.025919E-4	45.0	10
ACTACGG	20	7.025919E-4	45.0	2
GCGATAT	20	7.025919E-4	45.0	9
TCAAGCG	20	7.025919E-4	45.0	17
CGTTTTT	730	0.0	42.534245	1
CGTTATT	195	0.0	41.538464	1
CGTTTTA	450	0.0	41.5	1
CGAGATA	60	3.6379788E-12	41.249996	19
GCAATAG	45	1.9210347E-8	40.0	2
GGTATCT	40	3.4481673E-7	39.375	8
AGTACGG	40	3.4481673E-7	39.375	2
GTTTGCG	35	6.2346644E-6	38.57143	1
GGACTAA	105	0.0	38.57143	8
ACGGGTA	35	6.2346644E-6	38.57143	5
TTTGCGG	65	9.094947E-12	38.07692	2
ACCGGCG	30	1.1381467E-4	37.499996	20
AACGGGC	60	1.546141E-10	37.499996	4
CGAGGTT	30	1.1381467E-4	37.499996	5
CACGTGA	30	1.1381467E-4	37.499996	43