SRR2934687.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934687.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	216631
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1155	0.5331646901874616	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	647	0.29866454939505427	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	291	0.1343298050602176	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGAC	40	6.7702786E-9	45.000004	26
ACGCCGG	20	7.020599E-4	45.000004	27
ATAGGCG	40	6.7702786E-9	45.000004	5
GAACTTA	20	7.020599E-4	45.000004	9
GGCCGAT	20	7.020599E-4	45.000004	8
TAAACGG	20	7.020599E-4	45.000004	2
CACGCCG	20	7.020599E-4	45.000004	26
TCTACGG	20	7.020599E-4	45.000004	2
GACGGGC	20	7.020599E-4	45.000004	4
CGAGACA	40	6.7702786E-9	45.000004	22
CGCCGGT	20	7.020599E-4	45.000004	28
ATCATCC	20	7.020599E-4	45.000004	35
CCACCTT	20	7.020599E-4	45.000004	24
TGGTACC	20	7.020599E-4	45.000004	19
ACACGCG	25	3.880294E-5	45.0	36
CGCAGGA	35	1.2058263E-7	45.0	4
TAGGCGA	35	1.2058263E-7	45.0	6
AGGCGAT	130	0.0	44.999996	7
TATGCGG	30	2.1573214E-6	44.999996	2
CGTTTTT	605	0.0	42.396694	1