##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934687.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 216631 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.926340182153062 31.0 31.0 34.0 30.0 34.0 2 32.10645752454635 33.0 31.0 34.0 30.0 34.0 3 31.91183625612216 33.0 31.0 34.0 30.0 34.0 4 35.724097659153124 37.0 35.0 37.0 35.0 37.0 5 32.01695048261791 37.0 35.0 37.0 0.0 37.0 6 33.92630325299703 37.0 35.0 37.0 19.0 37.0 7 20.80964404909731 32.0 0.0 37.0 0.0 37.0 8 28.177176858344374 35.0 17.0 37.0 17.0 37.0 9 34.96312623770375 37.0 32.0 39.0 32.0 39.0 10 36.22347678771736 37.0 35.0 39.0 32.0 39.0 11 36.582617446256535 38.0 35.0 39.0 32.0 39.0 12 37.063795117042346 39.0 37.0 39.0 34.0 39.0 13 36.916678591706635 39.0 37.0 39.0 33.0 39.0 14 38.31602125272929 40.0 38.0 41.0 34.0 41.0 15 38.49630016018021 40.0 38.0 41.0 34.0 41.0 16 38.559749066384775 40.0 38.0 41.0 34.0 41.0 17 38.528206950990395 40.0 38.0 41.0 34.0 41.0 18 38.42637480323684 40.0 38.0 41.0 34.0 41.0 19 38.372190499051385 40.0 37.0 41.0 34.0 41.0 20 38.339891335958384 40.0 37.0 41.0 34.0 41.0 21 38.24805314105553 40.0 37.0 41.0 34.0 41.0 22 38.25730851078562 40.0 37.0 41.0 34.0 41.0 23 38.17739381713605 40.0 37.0 41.0 34.0 41.0 24 38.05834345038337 40.0 37.0 41.0 34.0 41.0 25 37.9421135479225 40.0 36.0 41.0 33.0 41.0 26 37.823894087180506 40.0 36.0 41.0 33.0 41.0 27 37.79405071296352 40.0 36.0 41.0 33.0 41.0 28 37.760343625796864 40.0 36.0 41.0 33.0 41.0 29 37.76325179683425 40.0 36.0 41.0 33.0 41.0 30 37.645733990056826 40.0 36.0 41.0 33.0 41.0 31 37.53694069639156 40.0 36.0 41.0 33.0 41.0 32 37.45018949273188 40.0 36.0 41.0 33.0 41.0 33 37.29685963689408 40.0 36.0 41.0 32.0 41.0 34 37.1619712783489 40.0 36.0 41.0 32.0 41.0 35 37.008558331910024 40.0 36.0 41.0 31.0 41.0 36 36.84625930730135 40.0 35.0 41.0 31.0 41.0 37 36.785076928048156 40.0 35.0 41.0 31.0 41.0 38 36.6945727989069 40.0 35.0 41.0 30.0 41.0 39 36.63494144420697 39.0 35.0 41.0 30.0 41.0 40 36.5840299864747 39.0 35.0 41.0 30.0 41.0 41 36.50966389851868 39.0 35.0 41.0 30.0 41.0 42 36.420826197543285 39.0 35.0 41.0 30.0 41.0 43 36.3454030124959 39.0 35.0 41.0 30.0 41.0 44 36.209803767697146 39.0 35.0 40.0 29.0 41.0 45 36.12902123888086 39.0 35.0 40.0 29.0 41.0 46 36.03048040215851 39.0 35.0 40.0 28.0 41.0 47 36.0268059511335 39.0 35.0 40.0 28.0 41.0 48 35.94045173590114 39.0 35.0 40.0 28.0 41.0 49 35.834169624845934 39.0 35.0 40.0 28.0 41.0 50 35.70187553951189 39.0 35.0 40.0 27.0 41.0 51 33.97893653262922 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 7.0 11 4.0 12 4.0 13 2.0 14 5.0 15 5.0 16 13.0 17 30.0 18 44.0 19 123.0 20 186.0 21 279.0 22 533.0 23 822.0 24 1354.0 25 1861.0 26 2350.0 27 2472.0 28 2880.0 29 3235.0 30 3851.0 31 4860.0 32 6654.0 33 9644.0 34 13623.0 35 18743.0 36 23788.0 37 41851.0 38 46031.0 39 31364.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.06181479105022 18.998665934238407 24.16043871837364 17.779080556337735 2 30.27313727028911 25.566054719776947 26.78194718207459 17.378860827859356 3 29.911693155642542 24.114738887786142 29.676269785949376 16.297298170621932 4 26.817029880303373 26.654079979319672 28.92337661738163 17.605513522995324 5 21.41752565422308 37.67420175321168 24.688525649606934 16.219746942958302 6 24.942413597315248 35.032382253694074 27.064916840156766 12.960287308833914 7 50.14286967239222 42.617169287867384 5.157618254081826 2.0823427856585623 8 87.5262543218653 3.4801113414054314 7.089013114466535 1.9046212222627417 9 81.5834298876892 7.306433520594929 8.394920394588032 2.7152161971278352 10 34.8883585451759 41.05414275888493 14.876910506806503 9.180588189132672 11 24.43048317184521 25.787168041508373 33.86819060983885 15.914158176807566 12 24.49741726715013 24.656212638080422 33.78879292437371 17.057577170395742 13 21.074546117591662 27.041836117637825 35.05500136176263 16.828616403007878 14 17.90279322903924 30.299910908411075 32.34901745364237 19.448278408907314 15 17.678910220605545 29.181880709593734 34.821886064321355 18.317323005479363 16 20.35719726170308 28.639022115948315 34.07083935355512 16.932941268793478 17 20.299495455405737 27.246792933605995 32.39425566977949 20.059455941208785 18 20.885745807386755 27.40004893113174 32.679533400113556 19.03467186136795 19 21.062544141881816 29.139873794609265 30.84323111650687 18.954350947002045 20 22.390147301171115 28.67179674192521 31.482567130281446 17.45548882662223 21 21.403677220711717 28.740577295031645 32.43210805471055 17.423637429546094 22 21.444299292345047 26.622690196693917 32.045275145293154 19.887735365667886 23 19.71601479012699 28.632097899192637 32.138521264269656 19.513366046410717 24 18.25177375352558 27.833966514487766 35.01991866353384 18.894341068452807 25 18.48211936426458 30.08341373118344 32.085897216926476 19.348569687625503 26 19.154691618466423 30.94155499443755 30.757370828736423 19.146382558359605 27 18.67784389122517 30.326222932082665 31.925255388194675 19.07067778849749 28 17.809085495612354 29.721508002086498 33.5824512650544 18.886955237246745 29 17.979421227802113 27.250024234758648 33.7149346123131 21.055619925126138 30 19.550295202441017 28.855980907626332 32.179143335902985 19.414580554029666 31 20.237639119054982 28.98984909823617 30.971559933712168 19.800951848996682 32 20.39828094778679 28.95061186995398 30.513638398936436 20.13746878332279 33 19.97544211123985 28.969076447969126 31.070345426093223 19.985136014697805 34 18.557362519676314 29.651804220079303 30.792915141415587 20.997918118828792 35 18.691230710286156 28.886909075801707 31.86755358189733 20.55430663201481 36 20.329962009130735 29.870609469558833 29.91584768569595 19.883580835614477 37 18.754010275537667 29.730278676643696 31.817699221256422 19.69801182656222 38 18.375948040677464 30.431009412318645 31.26653156750419 19.926510979499703 39 18.495967797775943 30.804455502675054 31.336696963961757 19.362879735587242 40 21.137787297293553 29.712275713078924 29.755667471414526 19.394269518212997 41 18.168221538007025 29.252969334952063 31.390244240205696 21.188564886835216 42 19.603380864234573 28.88413938909944 30.31375934192244 21.19872040474355 43 19.812030595805773 28.73365307827596 30.330377462136077 21.12393886378219 44 19.21516311146604 30.282831173747066 29.31621051465395 21.185795200132944 45 18.697693312591458 30.658585336355372 29.56548231785848 21.078239033194695 46 19.647695851470935 30.80584034602619 28.807511390336565 20.738952412166313 47 18.698154927041834 29.64580323222438 31.097119064215185 20.558922776518596 48 19.47966819153307 28.751194427390352 31.24114277273336 20.52799460834322 49 19.399347277167163 28.93814827979375 31.08234740180307 20.58015704123602 50 18.276700933846033 29.54055513753803 31.057420221482612 21.12532370713333 51 18.527357580401695 29.11494661428881 29.75151294136112 22.606182863948373 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 131.0 1 274.5 2 418.0 3 1770.5 4 3123.0 5 2161.5 6 1200.0 7 1063.0 8 926.0 9 953.0 10 980.0 11 997.0 12 1014.0 13 1014.0 14 1014.0 15 1023.5 16 1033.0 17 1082.5 18 1132.0 19 1166.5 20 1201.0 21 1270.5 22 1340.0 23 1553.0 24 1766.0 25 2234.0 26 3237.0 27 3772.0 28 4605.0 29 5438.0 30 6247.0 31 7056.0 32 8009.5 33 8963.0 34 9660.0 35 10357.0 36 11196.0 37 12035.0 38 12772.5 39 13510.0 40 14484.0 41 15458.0 42 16246.5 43 17035.0 44 17716.0 45 18397.0 46 18100.0 47 17803.0 48 17078.0 49 16353.0 50 15001.5 51 13650.0 52 12305.0 53 10960.0 54 9666.0 55 8372.0 56 7308.0 57 6244.0 58 5326.5 59 4409.0 60 3900.0 61 3391.0 62 2829.0 63 2267.0 64 1796.0 65 1325.0 66 1041.5 67 758.0 68 589.0 69 420.0 70 345.5 71 271.0 72 214.0 73 157.0 74 127.0 75 75.0 76 53.0 77 49.0 78 45.0 79 33.0 80 21.0 81 17.5 82 14.0 83 13.5 84 13.0 85 7.5 86 2.0 87 1.5 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 216631.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.04546328133254 #Duplication Level Percentage of deduplicated Percentage of total 1 68.2279328347078 32.780426417711766 2 11.35590797431758 10.91199719212533 3 6.09875531963662 8.79052574314298 4 3.9516912988320234 7.594433567887809 5 2.753754824136412 6.615271314441914 6 2.0495667245858264 5.908342968523759 7 1.4772449069716056 4.968244115480784 8 1.1376482782700188 4.37270708645547 9 0.8300137937815514 3.589055752691793 >10 2.104499472788318 13.109483214485183 >50 0.0079905058290659 0.23130430153181966 >100 0.002996439685899712 0.26345655921362865 >500 9.988132286332374E-4 0.3104852346288119 >1k 9.988132286332374E-4 0.5542665316789456 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1155 0.5331646901874616 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 647 0.29866454939505427 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 291 0.1343298050602176 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.035082698228785354 0.0 2 0.0 0.0 0.0 0.13063688945718757 0.0 3 0.0 0.0 0.0 0.18603062350263813 0.0 4 0.0 0.0 0.0 0.26081216446399635 0.0 5 0.0 0.0 0.0 0.4348408122567869 0.0 6 0.0 0.0 0.0 0.6148704479045012 0.0 7 4.6161445037875464E-4 0.0 0.0 0.7699729032317628 0.0 8 4.6161445037875464E-4 0.0 0.0 1.2422044859692287 0.0 9 4.6161445037875464E-4 0.0 0.0 1.418541206013913 0.0 10 4.6161445037875464E-4 0.0 0.0 1.819222548942672 0.0 11 4.6161445037875464E-4 0.0 0.0 2.3394620345195287 0.0 12 4.6161445037875464E-4 0.0 0.0 2.7604544132649527 0.0 13 4.6161445037875464E-4 0.0 0.0 2.957102169126302 0.0 14 4.6161445037875464E-4 0.0 0.0 3.049886673652432 0.0 15 4.6161445037875464E-4 0.0 0.0 3.1671367440486358 0.0 16 4.6161445037875464E-4 0.0 0.0 3.413177246100512 0.0 17 4.6161445037875464E-4 0.0 0.0 3.7529254815792754 0.0 18 4.6161445037875464E-4 0.0 0.0 4.1217554274319 0.0 19 4.6161445037875464E-4 0.0 0.0 4.382567591895897 0.0 20 4.6161445037875464E-4 0.0 0.0 4.6175293471386825 0.0 21 4.6161445037875464E-4 0.0 0.0 4.9300423300451 0.0 22 4.6161445037875464E-4 0.0 0.0 5.256865360913258 0.0 23 4.6161445037875464E-4 0.0 0.0 5.643698270330654 0.0 24 4.6161445037875464E-4 0.0 0.0 5.926667928412831 4.6161445037875464E-4 25 4.6161445037875464E-4 0.0 0.0 6.173170044915086 4.6161445037875464E-4 26 4.6161445037875464E-4 0.0 0.0 6.396129824448025 4.6161445037875464E-4 27 4.6161445037875464E-4 0.0 0.0 6.6486329288052035 4.6161445037875464E-4 28 4.6161445037875464E-4 0.0 0.0 6.912214779971472 4.6161445037875464E-4 29 4.6161445037875464E-4 0.0 0.0 7.199800582557437 4.6161445037875464E-4 30 4.6161445037875464E-4 0.0 0.0 7.515544866616505 4.6161445037875464E-4 31 4.6161445037875464E-4 0.0 0.0 7.831289150675572 4.6161445037875464E-4 32 4.6161445037875464E-4 0.0 0.0 8.152572808139187 4.6161445037875464E-4 33 4.6161445037875464E-4 0.0 0.0 8.457238345389165 4.6161445037875464E-4 34 4.6161445037875464E-4 0.0 0.0 8.755441280333839 4.6161445037875464E-4 35 4.6161445037875464E-4 0.0 0.0 9.072108793293665 4.6161445037875464E-4 36 4.6161445037875464E-4 0.0 0.0 9.38554500510084 4.6161445037875464E-4 37 4.6161445037875464E-4 0.0 0.0 9.73037099953377 4.6161445037875464E-4 38 4.6161445037875464E-4 0.0 0.0 10.066426319409503 4.6161445037875464E-4 39 4.6161445037875464E-4 0.0 0.0 10.432024964109477 4.6161445037875464E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGAC 40 6.7702786E-9 45.000004 26 ACGCCGG 20 7.020599E-4 45.000004 27 ATAGGCG 40 6.7702786E-9 45.000004 5 GAACTTA 20 7.020599E-4 45.000004 9 GGCCGAT 20 7.020599E-4 45.000004 8 TAAACGG 20 7.020599E-4 45.000004 2 CACGCCG 20 7.020599E-4 45.000004 26 TCTACGG 20 7.020599E-4 45.000004 2 GACGGGC 20 7.020599E-4 45.000004 4 CGAGACA 40 6.7702786E-9 45.000004 22 CGCCGGT 20 7.020599E-4 45.000004 28 ATCATCC 20 7.020599E-4 45.000004 35 CCACCTT 20 7.020599E-4 45.000004 24 TGGTACC 20 7.020599E-4 45.000004 19 ACACGCG 25 3.880294E-5 45.0 36 CGCAGGA 35 1.2058263E-7 45.0 4 TAGGCGA 35 1.2058263E-7 45.0 6 AGGCGAT 130 0.0 44.999996 7 TATGCGG 30 2.1573214E-6 44.999996 2 CGTTTTT 605 0.0 42.396694 1 >>END_MODULE