##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934684.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 327465 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.976620402180387 33.0 31.0 34.0 30.0 34.0 2 32.1667720214374 33.0 31.0 34.0 30.0 34.0 3 32.02384682332463 33.0 31.0 34.0 30.0 34.0 4 35.79312903669094 37.0 35.0 37.0 35.0 37.0 5 32.04722947490571 37.0 35.0 37.0 0.0 37.0 6 33.94459560563725 37.0 35.0 37.0 19.0 37.0 7 20.71353274395737 32.0 0.0 37.0 0.0 37.0 8 28.07057242758768 35.0 17.0 37.0 17.0 37.0 9 34.840660833982255 37.0 32.0 39.0 32.0 39.0 10 36.26992197639442 37.0 35.0 39.0 32.0 39.0 11 36.655828867207184 38.0 35.0 39.0 33.0 39.0 12 36.98420594567359 39.0 37.0 39.0 33.0 39.0 13 36.74152352159773 39.0 35.0 39.0 33.0 39.0 14 38.07997190539447 40.0 37.0 41.0 33.0 41.0 15 38.26213183088269 40.0 37.0 41.0 33.0 41.0 16 38.34627517444613 40.0 38.0 41.0 34.0 41.0 17 38.30951399386194 40.0 37.0 41.0 34.0 41.0 18 38.2149725924908 40.0 37.0 41.0 34.0 41.0 19 38.15738170491503 40.0 37.0 41.0 34.0 41.0 20 38.130383399752645 40.0 37.0 41.0 34.0 41.0 21 38.04959919380697 40.0 37.0 41.0 34.0 41.0 22 38.05826882262227 40.0 37.0 41.0 34.0 41.0 23 38.001575740918874 40.0 36.0 41.0 34.0 41.0 24 37.8758004672255 40.0 36.0 41.0 33.0 41.0 25 37.71667506451071 40.0 36.0 41.0 33.0 41.0 26 37.58954697448582 39.0 36.0 41.0 33.0 41.0 27 37.56064312216573 39.0 36.0 41.0 33.0 41.0 28 37.480472722275664 39.0 36.0 41.0 33.0 41.0 29 37.459951445192615 40.0 36.0 41.0 33.0 41.0 30 37.302236880277285 39.0 35.0 41.0 33.0 41.0 31 37.1606767135419 39.0 35.0 41.0 32.0 41.0 32 37.05629303895073 39.0 35.0 41.0 32.0 41.0 33 36.92348495259035 39.0 35.0 41.0 31.0 41.0 34 36.750999343441286 39.0 35.0 41.0 31.0 41.0 35 36.604757760371335 39.0 35.0 41.0 30.0 41.0 36 36.42632342387736 39.0 35.0 41.0 30.0 41.0 37 36.33279892507596 39.0 35.0 41.0 30.0 41.0 38 36.18215687172675 39.0 35.0 41.0 29.0 41.0 39 36.06679797840991 39.0 35.0 40.0 29.0 41.0 40 35.927552562869316 39.0 35.0 40.0 28.0 41.0 41 35.78103003374407 39.0 35.0 40.0 27.0 41.0 42 35.67201685676332 39.0 35.0 40.0 27.0 41.0 43 35.60591513596873 38.0 35.0 40.0 27.0 41.0 44 35.45716336096987 38.0 35.0 40.0 26.0 41.0 45 35.329329852045255 38.0 34.0 40.0 26.0 41.0 46 35.204794405508984 38.0 34.0 40.0 26.0 41.0 47 35.12761363809873 38.0 34.0 40.0 25.0 41.0 48 35.014410700380196 38.0 34.0 40.0 25.0 41.0 49 34.90430122303147 38.0 34.0 40.0 24.0 41.0 50 34.751484891515126 38.0 34.0 40.0 24.0 41.0 51 32.89556441146382 36.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 13.0 9 17.0 10 6.0 11 7.0 12 4.0 13 8.0 14 10.0 15 12.0 16 41.0 17 60.0 18 120.0 19 195.0 20 347.0 21 595.0 22 959.0 23 1518.0 24 2292.0 25 3134.0 26 3942.0 27 4593.0 28 4953.0 29 5634.0 30 6850.0 31 8782.0 32 11738.0 33 17179.0 34 23657.0 35 30054.0 36 37453.0 37 61596.0 38 62292.0 39 39401.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.11869970836578 17.97108087887255 22.162368497396667 17.747850915365003 2 30.651214633624967 24.47040141694532 26.566808666575053 18.311575282854655 3 32.09197929549723 24.19067686622998 27.480188722458887 16.237155115813902 4 27.737010062144048 25.60578993174843 27.64509184187623 19.012108164231293 5 22.48698334173118 37.01586429084024 23.597636388621684 16.899515978806896 6 26.295329271830575 34.27633487548288 25.94903272105416 13.479303131632388 7 49.17411021025148 42.989632479807 5.526697509657521 2.3095598002839997 8 85.2338417846182 4.398027270089933 7.911379842120532 2.456751103171331 9 79.32969935718322 6.8581375108790255 9.512772357351167 4.299390774586597 10 42.36391675446231 28.626570778556488 16.81614829065702 12.193364176324186 11 31.69254729513078 24.529644389476736 26.41350984074634 17.364298474646144 12 28.03108729177164 23.320660223229964 29.711266852946117 18.93698563205228 13 23.610767562945657 26.02904127158628 31.25891316629258 19.101277999175483 14 20.85413708335242 26.882567602644556 31.868749331989676 20.394545982013344 15 20.19116546806529 25.984456354114183 33.74467500343548 20.07970317438505 16 24.302444536057287 25.00847418808117 31.483059258241337 19.206022017620203 17 24.328706884705237 24.78402271998534 29.290763898431894 21.59650649687753 18 25.360572885651898 24.196173636877223 30.287206266318538 20.156047211152337 19 24.71348083001237 26.02415525323317 27.94161208068038 21.320751836074084 20 26.00247354679126 26.130426152413232 29.160062907486296 18.707037393309207 21 25.28331272044341 25.93437466599484 30.110698853312567 18.671613760249187 22 24.780358206220512 23.890186737513933 30.323851403966835 21.005603652298717 23 23.138656039576748 26.242804574534684 29.82395065121463 20.794588734673937 24 22.326050112225733 25.339807307651203 31.827218175988275 20.506924404134793 25 22.758768112622725 26.42053349212893 29.733864687829232 21.086833707419114 26 22.496755378437392 27.313453346159132 28.74414059517811 21.445650680225366 27 21.625822606996167 26.296550776418854 30.857038156749578 21.2205884598354 28 19.619195944604765 27.3336081718657 30.835356450307668 22.211839433221872 29 21.65300108408532 26.529552776632613 30.360496541615134 21.456949597666927 30 22.04266104774556 25.779243583283712 31.042096101873483 21.135999267097247 31 23.770784664009895 25.582275968424106 29.270914448872396 21.376024918693602 32 24.135709159757532 25.97712732658452 29.132579054250073 20.754584459407877 33 23.137434534988472 25.224985876353195 28.809185714503837 22.82839387415449 34 21.00926816606355 25.60243079413067 31.16638419373063 22.221916846075153 35 21.534515139022492 26.64803872169545 30.57334371612233 21.244102423159728 36 23.54175255370803 27.097247034034172 28.140106576275326 21.220893835982473 37 21.622768845525474 28.018261493594736 28.202097934130364 22.156871726749426 38 22.253675965370345 28.139495823981186 27.532408043607713 22.074420167040753 39 22.16939214877926 27.646313346464506 27.881452979707756 22.30284152504848 40 24.3161864626754 25.52303299589269 28.19934954880674 21.961430992625168 41 21.010795046798894 25.130930023055896 28.774067457590885 25.084207472554322 42 21.361061487487213 25.739239308017652 28.556639640877652 24.343059563617487 43 22.383155451727667 25.9496434733483 28.976226466950667 22.69097460797337 44 21.88447620356374 26.491380758248972 28.4928160261402 23.13132701204709 45 20.858412349411388 27.100911547799 28.041164704624922 23.99951139816469 46 21.34793031316324 27.312537217717924 27.839921823706348 23.499610645412485 47 20.647702807933673 27.225199639656143 29.599499183118805 22.527598369291375 48 21.229749744247478 26.95891163941185 29.72470340341716 22.086635212923518 49 22.205121157986348 26.452597987571192 28.897744797153894 22.444536057288563 50 21.159513230421574 27.130227657917636 29.509107843586335 22.20115126807445 51 20.903913395324693 26.89233963935077 27.95504863115142 24.24869833417312 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 188.0 1 543.5 2 899.0 3 2472.0 4 4045.0 5 2768.5 6 1492.0 7 1324.0 8 1156.0 9 1171.5 10 1187.0 11 1168.5 12 1150.0 13 1148.5 14 1147.0 15 1084.5 16 1022.0 17 1053.5 18 1085.0 19 1137.5 20 1190.0 21 1268.0 22 1346.0 23 1642.0 24 1938.0 25 2537.5 26 3530.5 27 3924.0 28 4742.0 29 5560.0 30 6405.5 31 7251.0 32 8051.5 33 8852.0 34 10043.0 35 11234.0 36 11994.5 37 12755.0 38 13579.5 39 14404.0 40 15671.5 41 16939.0 42 18018.0 43 19097.0 44 20071.5 45 21046.0 46 21453.5 47 21861.0 48 22674.5 49 23488.0 50 23121.5 51 22755.0 52 21928.5 53 21102.0 54 19884.0 55 18666.0 56 17801.0 57 16936.0 58 16123.5 59 15311.0 60 14094.5 61 12878.0 62 11398.5 63 9919.0 64 8758.5 65 7598.0 66 6495.0 67 5392.0 68 4517.5 69 3643.0 70 2948.0 71 2253.0 72 1875.0 73 1497.0 74 1242.5 75 797.5 76 607.0 77 450.5 78 294.0 79 213.0 80 132.0 81 90.5 82 49.0 83 36.0 84 23.0 85 18.0 86 13.0 87 9.0 88 5.0 89 5.0 90 5.0 91 3.5 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 327465.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.306204692966716 #Duplication Level Percentage of deduplicated Percentage of total 1 68.93281876243958 29.852187593893852 2 9.590802795275225 8.306825380441325 3 5.285092724989012 6.866319221090501 4 3.6331190207996062 6.293463839546343 5 2.6622643821194867 5.764628313943052 6 2.1584025279265733 5.6083333010522995 7 1.7147061211860375 5.198018999065588 8 1.3030475765057323 4.514403605826516 9 1.0203921066787152 3.977037849502437 >10 3.672920432985087 21.856506172908816 >50 0.016431665653630183 0.5039935309561007 >100 0.008573042949720095 0.570821402464092 >500 7.144202458100079E-4 0.24039470445235742 >1k 7.144202458100079E-4 0.4470660848567007 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1445 0.44126853251492526 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 777 0.23727726627273144 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.021070954147771517 0.0 2 0.0 0.0 0.0 0.10749240376834165 0.0 3 0.0 0.0 0.0 0.13772464232818774 0.0 4 0.0 0.0 0.0 0.19941062403615653 0.0 5 0.0 0.0 0.0 0.39454598201334495 0.0 6 0.0 0.0 0.0 0.5191394500175591 0.0 7 0.0 0.0 0.0 0.6293802391095231 0.0 8 0.0 0.0 0.0 0.8657413769410471 0.0 9 0.0 0.0 0.0 0.9573542210617929 0.0 10 0.0 0.0 0.0 1.3470141847220314 0.0 11 0.0 0.0 0.0 1.6832333226451681 0.0 12 0.0 0.0 0.0 2.0429664238926297 0.0 13 0.0 0.0 0.0 2.16908677263219 0.0 14 0.0 0.0 0.0 2.235658772693265 0.0 15 0.0 0.0 0.0 2.3504802039912662 0.0 16 0.0 0.0 0.0 2.5569144794100134 0.0 17 0.0 0.0 0.0 2.784419708976532 0.0 18 0.0 0.0 0.0 3.042767929397035 0.0 19 0.0 0.0 0.0 3.2162215809323134 0.0 20 3.0537614706915243E-4 0.0 0.0 3.3939504985265603 0.0 21 3.0537614706915243E-4 0.0 0.0 3.622066480387217 0.0 22 3.0537614706915243E-4 0.0 0.0 3.8773609393370285 0.0 23 3.0537614706915243E-4 0.0 0.0 4.115554334050968 0.0 24 3.0537614706915243E-4 0.0 0.0 4.325347747087475 0.0 25 3.0537614706915243E-4 0.0 0.0 4.512237949093796 0.0 26 3.0537614706915243E-4 0.0 0.0 4.700044279541325 0.0 27 3.0537614706915243E-4 0.0 0.0 4.926938756813705 0.0 28 3.0537614706915243E-4 0.0 0.0 5.139480555173836 0.0 29 3.0537614706915243E-4 0.0 0.0 5.386529858152779 0.0 30 3.0537614706915243E-4 0.0 0.0 5.7001511611927995 0.0 31 3.0537614706915243E-4 0.0 0.0 5.947505840318812 0.0 32 3.0537614706915243E-4 0.0 0.0 6.19363901485655 0.0 33 3.0537614706915243E-4 0.0 0.0 6.43824530865894 0.0 34 3.0537614706915243E-4 0.0 0.0 6.686210740079092 0.0 35 3.0537614706915243E-4 0.0 0.0 6.955247125647015 0.0 36 3.0537614706915243E-4 0.0 0.0 7.206266318537859 0.0 37 3.0537614706915243E-4 0.0 0.0 7.460950025193532 0.0 38 3.0537614706915243E-4 0.0 0.0 7.7495304841738815 0.0 39 3.0537614706915243E-4 0.0 0.0 8.181637732276732 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCCGC 25 3.8846752E-5 45.000004 9 CGATTGA 25 3.8846752E-5 45.000004 10 TCGATCA 25 3.8846752E-5 45.000004 17 CGTTATT 100 0.0 45.000004 1 CGTTTAG 25 3.8846752E-5 45.000004 2 CTCACGA 20 7.0258905E-4 45.0 24 CCGATTA 20 7.0258905E-4 45.0 11 GTCCGCA 20 7.0258905E-4 45.0 10 CGCACGG 20 7.0258905E-4 45.0 2 CACGGGC 30 2.1607302E-6 44.999996 4 CGTTTTA 210 0.0 42.857147 1 CGTTGAT 130 0.0 41.53846 25 TTAATCG 135 0.0 40.000004 20 ACGGGCG 45 1.9210347E-8 40.0 5 ATAGGCG 40 3.448131E-7 39.375 5 TCTCGTA 40 3.448131E-7 39.375 28 ACGGTTA 40 3.448131E-7 39.375 34 GGACCGA 115 0.0 39.130432 8 AGGCGAT 150 0.0 39.0 7 CGAAGGA 75 0.0 39.0 4 >>END_MODULE