SRR2934683.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934683.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	322228
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1569	0.48692230346214477	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	899	0.27899499733108235	No Hit
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA	660	0.20482391350224063	No Hit
GCTCAAATTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA	464	0.14399741797733284	No Hit
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT	375	0.11637722358081855	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCGCAA	25	3.8845355E-5	45.000004	1
TGCGACG	25	3.8845355E-5	45.000004	1
CGACTAG	25	3.8845355E-5	45.000004	2
AGTACGG	25	3.8845355E-5	45.000004	2
GCGAATG	20	7.0257223E-4	45.0	1
AGGCGAT	195	0.0	45.0	7
ACCTCGT	20	7.0257223E-4	45.0	17
CGTAGGA	45	3.8380676E-10	45.0	4
CGCTAGC	20	7.0257223E-4	45.0	41
CCTCAAC	20	7.0257223E-4	45.0	33
TGTACGG	40	6.7884685E-9	45.0	2
CGTTTTA	315	0.0	43.571426	1
CACGACC	90	0.0	42.5	27
CGTTTTT	590	0.0	41.18644	1
CGTTATT	105	0.0	40.714287	1
ACGGGAT	150	0.0	40.500004	5
GCGAGAC	95	0.0	40.263157	21
CGACCAA	95	0.0	40.263157	29
TCAAGCG	95	0.0	40.263157	17
AACACGT	90	0.0	40.0	41