##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934683.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 322228 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.944045830902343 33.0 31.0 34.0 30.0 34.0 2 32.133402435542536 33.0 31.0 34.0 30.0 34.0 3 31.95632905892722 33.0 31.0 34.0 30.0 34.0 4 35.751433767394516 37.0 35.0 37.0 35.0 37.0 5 32.05687587670842 37.0 35.0 37.0 0.0 37.0 6 33.937668359050114 37.0 35.0 37.0 19.0 37.0 7 20.804250406544433 32.0 0.0 37.0 0.0 37.0 8 28.119052348026862 35.0 17.0 37.0 17.0 37.0 9 34.85388917164244 37.0 32.0 39.0 32.0 39.0 10 36.238343657286144 37.0 35.0 39.0 32.0 39.0 11 36.658061993371156 38.0 35.0 39.0 33.0 39.0 12 36.990388793028536 39.0 37.0 39.0 33.0 39.0 13 36.762180816068124 39.0 37.0 39.0 33.0 39.0 14 38.13749581041995 40.0 37.0 41.0 33.0 41.0 15 38.33314609531139 40.0 38.0 41.0 34.0 41.0 16 38.398488027111235 40.0 38.0 41.0 34.0 41.0 17 38.3845289670668 40.0 38.0 41.0 34.0 41.0 18 38.25092170761076 40.0 37.0 41.0 34.0 41.0 19 38.18526943654803 40.0 37.0 41.0 34.0 41.0 20 38.163238452276026 40.0 37.0 41.0 34.0 41.0 21 38.06253336147076 40.0 37.0 41.0 34.0 41.0 22 38.03199908139578 40.0 37.0 41.0 34.0 41.0 23 37.96617612373847 40.0 36.0 41.0 34.0 41.0 24 37.80023151309011 40.0 36.0 41.0 33.0 41.0 25 37.665693235845424 40.0 36.0 41.0 33.0 41.0 26 37.512081507504 39.0 35.0 41.0 33.0 41.0 27 37.493231500676536 39.0 36.0 41.0 33.0 41.0 28 37.40583686085629 39.0 35.0 41.0 33.0 41.0 29 37.389559566518116 39.0 36.0 41.0 33.0 41.0 30 37.25021413409139 39.0 35.0 41.0 32.0 41.0 31 37.097654455851135 39.0 35.0 41.0 32.0 41.0 32 36.99336184316695 39.0 35.0 41.0 31.0 41.0 33 36.82709758307782 39.0 35.0 41.0 31.0 41.0 34 36.63743684596 39.0 35.0 41.0 30.0 41.0 35 36.48082724033914 39.0 35.0 41.0 30.0 41.0 36 36.2711154834465 39.0 35.0 41.0 30.0 41.0 37 36.19199138498206 39.0 35.0 41.0 30.0 41.0 38 36.058117233759944 39.0 35.0 40.0 29.0 41.0 39 35.962687910423675 39.0 35.0 40.0 28.0 41.0 40 35.84159042665442 39.0 35.0 40.0 28.0 41.0 41 35.71021140310587 39.0 35.0 40.0 27.0 41.0 42 35.596822746626614 38.0 35.0 40.0 27.0 41.0 43 35.50386682721551 38.0 35.0 40.0 26.0 41.0 44 35.3884702757054 38.0 34.0 40.0 26.0 41.0 45 35.279417058728605 38.0 34.0 40.0 26.0 41.0 46 35.13405725138722 38.0 34.0 40.0 25.0 41.0 47 35.0819947366461 38.0 34.0 40.0 25.0 41.0 48 34.999460009682586 38.0 34.0 40.0 25.0 41.0 49 34.85807564829872 38.0 34.0 40.0 24.0 41.0 50 34.698725746986604 37.0 34.0 40.0 24.0 41.0 51 32.84483036855891 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 7.0 9 10.0 10 10.0 11 17.0 12 7.0 13 12.0 14 13.0 15 19.0 16 38.0 17 68.0 18 116.0 19 232.0 20 404.0 21 662.0 22 1054.0 23 1631.0 24 2484.0 25 3390.0 26 4142.0 27 4531.0 28 4885.0 29 5485.0 30 6791.0 31 8592.0 32 11340.0 33 16197.0 34 23016.0 35 29505.0 36 37364.0 37 60066.0 38 61339.0 39 38794.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.64925456509056 18.46580682001564 23.67298931191579 18.211949302978013 2 31.283749394838438 24.372494010452225 25.595230706208028 18.748525888501312 3 31.12640738855717 23.71736782650794 28.75820847350323 16.398016311431657 4 26.366113435207367 25.703228769691027 27.696537855183283 20.23411993991832 5 22.178705761138076 37.61622205394938 24.00070757351937 16.204364611393174 6 25.660091612150403 35.043819903918966 25.538128281837707 13.757960202092928 7 48.13548170860385 42.77468128157702 6.064960214506499 3.0248767953126356 8 83.6339486326452 4.361197661283315 9.301488387104783 2.703365318966694 9 78.229390369552 6.334024355425351 11.154524125774296 4.282061149248358 10 41.59911615377931 29.359956304231787 16.824112119368895 12.216815422620009 11 30.168700423302752 26.131186613205553 26.621832987822287 17.078279975669403 12 27.802363543826107 23.041448911950543 30.242871507131596 18.91331603709175 13 23.339995282843205 25.70788385863426 30.52434921856574 20.427771639956802 14 20.171741748079 27.462542050970118 30.867274104050544 21.49844209690033 15 19.38565239519843 25.67126382561416 34.76048015690753 20.182603622279878 16 23.37630497660042 24.868416152537954 32.086286728651764 19.668992142209866 17 23.136102387129608 24.180394006728157 29.346301376664968 23.337202229477263 18 24.154325508646053 25.22934071526993 30.577106893255706 20.039226882828306 19 24.249910001613763 26.63641893317775 28.366870663008804 20.746800402199685 20 25.81650260064302 25.672194843402806 29.85680946410616 18.65449309184801 21 24.625110170438322 27.233201335700187 28.830827861017667 19.310860632843823 22 26.099842347654455 23.712402398301823 28.169494891815734 22.018260362227988 23 23.136412726392493 26.702521196171652 29.281130131459708 20.87993594597614 24 21.813126109462864 26.09518725871122 31.665777027446406 20.42590960437951 25 22.01763968370222 27.242821852849534 30.01694452375337 20.722593939694875 26 21.66074953138771 27.590091488014696 29.071340789751353 21.67781819084623 27 21.29299750487233 26.840311828891345 30.43807490348449 21.42861576275184 28 20.52987325744504 26.728279354990875 31.26109462864804 21.480752758916047 29 20.67821542510272 25.69360825254168 30.955100115446204 22.673076206909393 30 21.161723996673164 27.358578397904587 30.334731928944723 21.144965676477526 31 23.14168849386149 27.12427225442854 28.47300669091451 21.261032560795464 32 22.894348101344388 27.389612324192807 27.726330424419977 21.989709150042827 33 22.442494134587932 27.31016547289497 27.73719229862085 22.510148093896248 34 20.96807229663468 27.114651737279193 29.495884901374183 22.421391064711944 35 22.040294449892624 26.911689859354247 28.92858472882555 22.11943096192758 36 22.73110964906836 28.0428764725598 28.249872760902218 20.97614111746962 37 21.525441612771083 27.960946907158906 28.65393448117482 21.859676998895193 38 21.34885857219112 28.958377298062242 27.778157081321304 21.91460704842534 39 22.06419057313455 27.770088260486364 28.3929391610909 21.772782005288178 40 23.836538103454696 26.424767555892103 28.549970828109288 21.188723512543913 41 20.32101493352533 26.96630956962151 29.0462033094579 23.66647218739526 42 21.817470859143214 26.330424419975916 27.734399245254913 24.117705475625957 43 22.10639671288653 26.65876336010527 28.104323646610474 23.130516280397732 44 21.665714959593828 27.812915078764107 28.562384398624573 21.958985563017492 45 21.47268393808111 27.839293916109092 27.15251312735082 23.53550901845898 46 22.213463758580883 28.183770497908313 27.226994550442544 22.37577119306826 47 20.6577330337525 27.523989225020795 30.15225244237 21.666025298856713 48 21.837953250493438 26.721451891207472 29.263130454212543 22.177464404086546 49 21.86495276636419 26.440594858299093 29.42667924575146 22.267773129585265 50 20.23691299328426 27.351130255595418 29.57843514530084 22.83352160581948 51 20.671387961319315 26.90517273483372 28.49038568963591 23.933053614211055 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 266.0 1 632.0 2 998.0 3 2695.0 4 4392.0 5 3035.0 6 1678.0 7 1530.0 8 1382.0 9 1353.0 10 1324.0 11 1331.0 12 1338.0 13 1353.0 14 1368.0 15 1294.0 16 1220.0 17 1235.5 18 1251.0 19 1263.0 20 1275.0 21 1415.5 22 1556.0 23 1683.5 24 1811.0 25 2075.0 26 2803.0 27 3267.0 28 4442.0 29 5617.0 30 6322.5 31 7028.0 32 7633.5 33 8239.0 34 9720.0 35 11201.0 36 11973.0 37 12745.0 38 13741.0 39 14737.0 40 15976.0 41 17215.0 42 19164.0 43 21113.0 44 22728.5 45 24344.0 46 23639.5 47 22935.0 48 22484.0 49 22033.0 50 21042.5 51 20052.0 52 19392.0 53 18732.0 54 17557.0 55 16382.0 56 15669.0 57 14956.0 58 14339.0 59 13722.0 60 13110.0 61 12498.0 62 11257.5 63 10017.0 64 9061.5 65 8106.0 66 6870.0 67 5634.0 68 4667.0 69 3700.0 70 2988.5 71 2277.0 72 1893.5 73 1510.0 74 1208.5 75 715.5 76 524.0 77 378.5 78 233.0 79 194.5 80 156.0 81 111.0 82 66.0 83 50.5 84 35.0 85 28.5 86 22.0 87 14.0 88 6.0 89 8.0 90 10.0 91 8.0 92 6.0 93 4.0 94 2.0 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 322228.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.94112740830558 #Duplication Level Percentage of deduplicated Percentage of total 1 69.22064525962853 29.03191902119204 2 9.090745612575134 7.6255223994701735 3 5.141287048571719 6.468941254404537 4 3.5550556943669376 5.964121752842639 5 2.6461830170920235 5.549194953277551 6 2.0801933145159133 5.234739170281045 7 1.688032761120516 4.9558597972484595 8 1.3118535472931618 4.401649341444811 9 1.1070663960539704 4.178845148971794 >10 4.128208320314735 24.116263492181833 >50 0.01798772398087615 0.5375281140779943 >100 0.01049283898884442 0.952147752948681 >500 0.0014989769984063458 0.49006218119742284 >1k 7.494884992031729E-4 0.49320562046103683 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1569 0.48692230346214477 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 899 0.27899499733108235 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 660 0.20482391350224063 No Hit GCTCAAATTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 464 0.14399741797733284 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 375 0.11637722358081855 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019241034298695333 0.0 2 0.0 0.0 0.0 0.11513586652928982 0.0 3 0.0 0.0 0.0 0.15082488176074085 0.0 4 0.0 0.0 0.0 0.21258239507429522 0.0 5 0.0 0.0 0.0 0.44812989560187194 0.0 6 0.0 0.0 0.0 0.5989547773626128 0.0 7 0.0 0.0 0.0 0.7441935523914743 0.0 8 0.0 0.0 0.0 1.1013940439688668 0.0 9 0.0 0.0 0.0 1.2283228024876796 0.0 10 0.0 0.0 0.0 1.6385913080179253 0.0 11 0.0 0.0 0.0 1.9988951922241394 0.0 12 0.0 0.0 0.0 2.3908536812443364 0.0 13 0.0 0.0 0.0 2.573022828556178 0.0 14 0.0 0.0 0.0 2.636332038184143 0.0 15 0.0 0.0 0.0 2.780639795424358 0.0 16 0.0 0.0 0.0 2.9761535310401332 0.0 17 0.0 0.0 0.0 3.2411832615415173 0.0 18 3.103392628821828E-4 0.0 0.0 3.50745434909443 0.0 19 3.103392628821828E-4 0.0 0.0 3.6827960326228633 0.0 20 3.103392628821828E-4 0.0 0.0 3.885447571284929 0.0 21 3.103392628821828E-4 0.0 0.0 4.116339982869273 0.0 22 3.103392628821828E-4 0.0 0.0 4.381990391896421 0.0 23 3.103392628821828E-4 0.0 0.0 4.656950978810035 0.0 24 3.103392628821828E-4 0.0 0.0 4.871395409461623 0.0 25 3.103392628821828E-4 0.0 0.0 5.123080551659074 0.0 26 3.103392628821828E-4 0.0 0.0 5.310525466439912 0.0 27 3.103392628821828E-4 0.0 0.0 5.512866665839096 0.0 28 3.103392628821828E-4 0.0 0.0 5.714897525975396 0.0 29 3.103392628821828E-4 0.0 0.0 5.9203421180034015 0.0 30 3.103392628821828E-4 0.0 0.0 6.16613081420609 0.0 31 3.103392628821828E-4 0.0 0.0 6.399816279156374 0.0 32 3.103392628821828E-4 0.0 0.0 6.659570242188761 0.0 33 3.103392628821828E-4 0.0 0.0 6.890772993035987 0.0 34 3.103392628821828E-4 0.0 0.0 7.17845748972777 0.0 35 3.103392628821828E-4 0.0 0.0 7.457762826321735 0.0 36 3.103392628821828E-4 0.0 0.0 7.703861861787306 0.0 37 3.103392628821828E-4 0.0 0.0 7.949029879464231 0.0 38 3.103392628821828E-4 0.0 0.0 8.206611467656442 0.0 39 3.103392628821828E-4 0.0 0.0 8.52191615874474 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGCGCAA 25 3.8845355E-5 45.000004 1 TGCGACG 25 3.8845355E-5 45.000004 1 CGACTAG 25 3.8845355E-5 45.000004 2 AGTACGG 25 3.8845355E-5 45.000004 2 GCGAATG 20 7.0257223E-4 45.0 1 AGGCGAT 195 0.0 45.0 7 ACCTCGT 20 7.0257223E-4 45.0 17 CGTAGGA 45 3.8380676E-10 45.0 4 CGCTAGC 20 7.0257223E-4 45.0 41 CCTCAAC 20 7.0257223E-4 45.0 33 TGTACGG 40 6.7884685E-9 45.0 2 CGTTTTA 315 0.0 43.571426 1 CACGACC 90 0.0 42.5 27 CGTTTTT 590 0.0 41.18644 1 CGTTATT 105 0.0 40.714287 1 ACGGGAT 150 0.0 40.500004 5 GCGAGAC 95 0.0 40.263157 21 CGACCAA 95 0.0 40.263157 29 TCAAGCG 95 0.0 40.263157 17 AACACGT 90 0.0 40.0 41 >>END_MODULE