SRR2934682.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934682.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	457760
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1467	0.3204736106256554	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	828	0.18088081090527788	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCACGC	25	3.887114E-5	45.000004	25
ATTGCGG	50	2.1827873E-11	45.000004	2
TCGCCTG	20	7.028834E-4	45.0	40
CCCCTCG	20	7.028834E-4	45.0	20
CTCGTAC	45	3.8380676E-10	45.0	29
CACGGCC	20	7.028834E-4	45.0	25
GCACGCG	20	7.028834E-4	45.0	1
TCTCGTA	45	3.8380676E-10	45.0	28
CACGTAT	20	7.028834E-4	45.0	21
TAGTACG	20	7.028834E-4	45.0	1
CGGCTAG	30	2.1626292E-6	44.999996	2
CGTTTTA	275	0.0	43.363636	1
ATAGGCG	50	1.0786607E-9	40.500004	5
TCGTACG	50	1.0786607E-9	40.500004	30
CACGACC	150	0.0	40.5	27
CGTTATT	145	0.0	40.34483	1
TACGGTT	45	1.9239451E-8	40.0	33
ATAGCGG	40	3.4521508E-7	39.375	2
TCGTCCC	195	0.0	39.23077	38
TGGGCGA	155	0.0	39.193546	6