##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934682.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 457760 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02596994058022 33.0 31.0 34.0 30.0 34.0 2 32.225231562390775 33.0 31.0 34.0 30.0 34.0 3 32.11145796924152 33.0 31.0 34.0 30.0 34.0 4 35.8549239776302 37.0 35.0 37.0 35.0 37.0 5 32.08606256553652 37.0 35.0 37.0 0.0 37.0 6 33.958742572527086 37.0 35.0 37.0 19.0 37.0 7 20.80765248164977 32.0 0.0 37.0 0.0 37.0 8 28.139544739601536 35.0 17.0 37.0 17.0 37.0 9 34.89990387976232 37.0 32.0 39.0 32.0 39.0 10 36.28431055574974 37.0 35.0 39.0 32.0 39.0 11 36.6465571478504 38.0 35.0 39.0 33.0 39.0 12 36.94753364208319 39.0 37.0 39.0 33.0 39.0 13 36.67522063963649 39.0 35.0 39.0 33.0 39.0 14 37.911667686123735 40.0 37.0 41.0 33.0 41.0 15 38.129179045788185 40.0 37.0 41.0 33.0 41.0 16 38.26192764767564 40.0 37.0 41.0 33.0 41.0 17 38.24484227542817 40.0 37.0 41.0 34.0 41.0 18 38.14401433065362 40.0 37.0 41.0 33.0 41.0 19 38.109830478853546 40.0 37.0 41.0 34.0 41.0 20 38.07553303040895 40.0 37.0 41.0 34.0 41.0 21 37.984952813701504 40.0 37.0 41.0 33.0 41.0 22 37.98685555749738 40.0 36.0 41.0 34.0 41.0 23 37.939433327507864 40.0 36.0 41.0 34.0 41.0 24 37.82868752184551 40.0 36.0 41.0 33.0 41.0 25 37.66845945473611 40.0 36.0 41.0 33.0 41.0 26 37.539131859489686 39.0 35.0 41.0 33.0 41.0 27 37.50607742048235 39.0 35.0 41.0 33.0 41.0 28 37.41316628801118 39.0 35.0 41.0 33.0 41.0 29 37.36172885354771 39.0 35.0 41.0 33.0 41.0 30 37.163279884655715 39.0 35.0 41.0 32.0 41.0 31 37.016231212862635 39.0 35.0 41.0 31.0 41.0 32 36.91703075847606 39.0 35.0 41.0 31.0 41.0 33 36.7625502446697 39.0 35.0 41.0 31.0 41.0 34 36.60166681230339 39.0 35.0 41.0 30.0 41.0 35 36.43494407549808 39.0 35.0 41.0 30.0 41.0 36 36.28133301293254 39.0 35.0 41.0 30.0 41.0 37 36.22333100314575 39.0 35.0 41.0 30.0 41.0 38 36.04576852499126 39.0 35.0 40.0 29.0 41.0 39 35.91265073400909 39.0 35.0 40.0 28.0 41.0 40 35.765892607479906 39.0 35.0 40.0 27.0 41.0 41 35.62184987766515 38.0 35.0 40.0 27.0 41.0 42 35.52664278224397 38.0 35.0 40.0 26.0 41.0 43 35.469044914365604 38.0 34.0 40.0 26.0 41.0 44 35.30894792030759 38.0 34.0 40.0 26.0 41.0 45 35.195381859489686 38.0 34.0 40.0 26.0 41.0 46 35.092432715833624 38.0 34.0 40.0 26.0 41.0 47 35.010828818594895 38.0 34.0 40.0 25.0 41.0 48 34.868090265641385 38.0 34.0 40.0 24.0 41.0 49 34.768601450541766 37.0 34.0 40.0 24.0 41.0 50 34.59429613771409 37.0 34.0 40.0 24.0 41.0 51 32.77800157287662 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 13.0 9 24.0 10 20.0 11 18.0 12 14.0 13 13.0 14 17.0 15 35.0 16 48.0 17 91.0 18 219.0 19 395.0 20 555.0 21 1024.0 22 1611.0 23 2359.0 24 3384.0 25 4510.0 26 5633.0 27 6600.0 28 7166.0 29 8134.0 30 9873.0 31 12322.0 32 16665.0 33 24546.0 34 33031.0 35 41211.0 36 52614.0 37 85806.0 38 85750.0 39 54055.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.44809507165327 17.96640160782943 23.369669695910524 15.21583362460678 2 31.80334673191192 24.013238378189445 25.81986193638588 18.36355295351276 3 33.54727368053128 23.436953862285915 26.461246067808457 16.554526389374345 4 28.870587207270187 25.877315623907727 25.77420482348829 19.4778923453338 5 23.046137714085983 37.01634044040546 23.073881509961552 16.86364033554701 6 26.6488989863684 35.36176162181056 24.873951415588955 13.115387976232087 7 50.12910695560993 42.822658161481996 4.624257252708843 2.4239776301992313 8 86.7981038098567 3.949012583012933 6.805749737853898 2.4471338692764766 9 80.9756204124432 6.334323663054876 8.67594372596994 4.014112198531982 10 46.04312303390423 25.253407899335894 16.00773331003146 12.695735756728416 11 35.062696609577074 25.526913666550154 22.94542991960853 16.464959804264243 12 30.829255505068158 23.442852149598043 27.769355120587207 17.958537224746593 13 25.865300594197834 25.090003495281373 29.236499475707795 19.808196434813002 14 21.331265291855996 25.53062740300594 31.976800069905625 21.161307235232435 15 21.239295700803915 24.995630898287313 33.64055400209717 20.124519398811604 16 27.21753757427473 23.73361586857742 29.86936385879063 19.179482698357216 17 26.829342887102413 23.769005592450192 27.418079342887104 21.983572177560294 18 27.066366655015727 23.807016777350576 29.140597693114294 19.9860188745194 19 26.98903355470115 25.949624257252708 26.36578119538623 20.69556099265991 20 28.025602936036353 26.79482698357218 26.657637189793775 18.521932890597693 21 27.499563089828733 25.81855120587207 28.20102236980077 18.480863334498427 22 26.701109751835023 23.43127403005942 28.82361936385879 21.043996854246767 23 25.367222998951416 25.48606256553653 29.523767913317023 19.622946522195036 24 24.521583362460678 24.759044040545263 30.01835022719329 20.70102236980077 25 24.67581265291856 25.467493883257603 28.830391471513455 21.02630199231038 26 23.204954561342188 26.791331702202026 27.530146801817544 22.47356693463824 27 22.783991611324712 25.707357567284166 29.61726668996854 21.89138413142258 28 21.2436648025166 27.553084585809156 28.64055400209717 22.56269660957707 29 23.745412443201676 26.59581440055924 28.23684900384481 21.42192415239427 30 24.606343935686823 25.172142607479902 28.621548409646973 21.5999650471863 31 25.67983222649423 25.212993708493535 28.09463474309682 21.012539321915412 32 27.221251310730516 24.880505068157987 26.928958406151693 20.969285214959804 33 26.197570779447744 25.476232086682977 27.22955260398462 21.096644529884657 34 22.995456134218806 26.177909821740652 29.496679482698358 21.329954561342188 35 23.52018524991262 27.16423453337994 28.557322614470465 20.75825760223698 36 25.256903180706047 28.342581265291855 25.964042292904576 20.436473261097518 37 23.394355120587207 28.986805312827684 26.344591052079693 21.274248514505416 38 24.17598741698707 28.06579867179308 27.06833275078644 20.689881160433416 39 23.655408947920307 27.278923453337995 26.511709192590004 22.553958406151693 40 27.006073051380636 24.380242922055224 27.439051031108004 21.174632995456133 41 22.21644529884656 25.623252359314925 27.544783292555053 24.615519049283467 42 22.875524292205522 25.75978678783642 28.08567808458581 23.279010835372247 43 22.42332226494233 25.584367354072 28.297142607479902 23.69516777350577 44 23.07431842013282 26.149729115693816 27.834891646277526 22.941060817895842 45 23.026913666550158 26.066716183152742 26.423234882908076 24.483135267389024 46 23.021233834323663 26.970901782593497 26.66135092624956 23.346513456833275 47 21.32121635791681 26.87740300594198 29.257908074099966 22.543472562041245 48 22.84909122684376 27.086682977979727 28.662399510660606 21.401826284515906 49 23.926074799021322 26.38959279972038 28.482392520097864 21.201939881160435 50 21.486805312827684 27.48995106606082 28.373820342537577 22.649423278573924 51 21.932235232436213 26.917817196784345 26.982261447046486 24.16768612373296 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 248.0 1 711.5 2 1175.0 3 2702.5 4 4230.0 5 2883.0 6 1536.0 7 1359.0 8 1182.0 9 1174.5 10 1167.0 11 1179.0 12 1191.0 13 1187.0 14 1183.0 15 1257.0 16 1331.0 17 1289.5 18 1248.0 19 1340.5 20 1433.0 21 1727.5 22 2022.0 23 2193.0 24 2364.0 25 2789.5 26 3981.0 27 4747.0 28 5544.0 29 6341.0 30 7219.5 31 8098.0 32 9684.5 33 11271.0 34 12845.0 35 14419.0 36 15479.5 37 16540.0 38 17546.5 39 18553.0 40 20076.0 41 21599.0 42 23481.5 43 25364.0 44 26218.5 45 27073.0 46 28213.0 47 29353.0 48 29939.5 49 30526.0 50 30659.0 51 30792.0 52 30230.5 53 29669.0 54 29046.5 55 28424.0 56 27976.5 57 27529.0 58 26764.0 59 25999.0 60 24234.0 61 22469.0 62 20225.5 63 17982.0 64 15346.5 65 12711.0 66 10838.0 67 8965.0 68 7639.0 69 6313.0 70 5013.5 71 3714.0 72 3052.0 73 2390.0 74 1934.5 75 1174.5 76 870.0 77 682.5 78 495.0 79 384.5 80 274.0 81 204.0 82 134.0 83 100.5 84 67.0 85 49.0 86 31.0 87 26.0 88 21.0 89 16.0 90 11.0 91 7.5 92 4.0 93 3.5 94 3.0 95 2.0 96 1.0 97 1.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 457760.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.94337160597023 #Duplication Level Percentage of deduplicated Percentage of total 1 67.8536336195628 26.42449268861989 2 8.736583610678556 6.804640442345683 3 4.896163652573951 5.7201936169749565 4 3.4686600443505586 5.403252683276998 5 2.624125811323199 5.109615330558873 6 2.1738639780795594 5.0794555631511 7 1.8696002993350134 5.096597744814562 8 1.5383811661416256 4.792779953974332 9 1.3356330662104783 4.681264934399048 >10 5.4775086038703815 29.260697288251574 >50 0.016082047565974845 0.43616566120212835 >100 0.008615382624629296 0.6775106604006342 >500 5.74358841641953E-4 0.18520264998736385 >1k 5.74358841641953E-4 0.32813078204282947 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1467 0.3204736106256554 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 828 0.18088081090527788 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00917511359664453 0.0 2 0.0 0.0 0.0 0.04259874169870675 0.0 3 0.0 0.0 0.0 0.06291506466270534 0.0 4 0.0 0.0 0.0 0.09044040545263894 0.0 5 0.0 0.0 0.0 0.1732348829080741 0.0 6 0.0 0.0 0.0 0.27328731212862634 0.0 7 0.0 0.0 0.0 0.3558633344984271 0.0 8 0.0 0.0 0.0 0.5719154141908424 0.0 9 0.0 0.0 0.0 0.6678171967843411 0.0 10 0.0 0.0 0.0 0.8895491087032507 0.0 11 0.0 0.0 0.0 1.1414278224397063 0.0 12 0.0 0.0 0.0 1.3391296749388326 0.0 13 0.0 0.0 0.0 1.4278224397063963 0.0 14 0.0 0.0 0.0 1.475882558545963 0.0 15 0.0 0.0 0.0 1.548628102062216 0.0 16 0.0 0.0 0.0 1.6976144704648723 0.0 17 0.0 0.0 0.0 1.8492222998951415 0.0 18 0.0 0.0 0.0 2.03359839217057 0.0 19 0.0 0.0 0.0 2.1428259349877665 0.0 20 0.0 0.0 0.0 2.279578818594897 0.0 21 0.0 0.0 0.0 2.4381772107654665 0.0 22 0.0 0.0 0.0 2.608790632645928 0.0 23 0.0 0.0 0.0 2.785739252009787 0.0 24 0.0 0.0 0.0 2.9238028661307234 0.0 25 0.0 0.0 0.0 3.079124432016777 0.0 26 0.0 0.0 0.0 3.2228678783642084 0.0 27 0.0 0.0 0.0 3.3849615519049285 0.0 28 0.0 0.0 0.0 3.542467668647326 0.0 29 0.0 0.0 0.0 3.7163579168123033 0.0 30 0.0 0.0 0.0 4.058895491087032 0.0 31 0.0 0.0 0.0 4.269704648724223 0.0 32 0.0 0.0 0.0 4.464785040195736 0.0 33 0.0 0.0 0.0 4.650253407899336 0.0 34 0.0 0.0 0.0 4.861062565536526 0.0 35 0.0 0.0 0.0 5.10791681230339 0.0 36 0.0 0.0 0.0 5.306492485145054 0.0 37 0.0 0.0 0.0 5.5103110800419435 0.0 38 0.0 0.0 0.0 5.796705697308633 0.0 39 0.0 0.0 0.0 6.337600489339392 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCACGC 25 3.887114E-5 45.000004 25 ATTGCGG 50 2.1827873E-11 45.000004 2 TCGCCTG 20 7.028834E-4 45.0 40 CCCCTCG 20 7.028834E-4 45.0 20 CTCGTAC 45 3.8380676E-10 45.0 29 CACGGCC 20 7.028834E-4 45.0 25 GCACGCG 20 7.028834E-4 45.0 1 TCTCGTA 45 3.8380676E-10 45.0 28 CACGTAT 20 7.028834E-4 45.0 21 TAGTACG 20 7.028834E-4 45.0 1 CGGCTAG 30 2.1626292E-6 44.999996 2 CGTTTTA 275 0.0 43.363636 1 ATAGGCG 50 1.0786607E-9 40.500004 5 TCGTACG 50 1.0786607E-9 40.500004 30 CACGACC 150 0.0 40.5 27 CGTTATT 145 0.0 40.34483 1 TACGGTT 45 1.9239451E-8 40.0 33 ATAGCGG 40 3.4521508E-7 39.375 2 TCGTCCC 195 0.0 39.23077 38 TGGGCGA 155 0.0 39.193546 6 >>END_MODULE