SRR2934680.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934680.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	123103
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	672	0.5458843407553025	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	403	0.3273681388755757	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	142	0.1153505601000788	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	135	0.10966426488387773	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC	129	0.10479029755570539	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTTATA	35	1.200151E-7	45.000004	7
TCACTTA	35	1.200151E-7	45.000004	5
GGCGATA	35	1.200151E-7	45.000004	8
GCGAGAC	85	0.0	45.0	21
GTTGATT	75	0.0	45.0	26
GGTGTTA	20	7.008741E-4	45.0	13
ATTAGGA	20	7.008741E-4	45.0	4
TTAATCG	75	0.0	45.0	20
ATAGGGT	20	7.008741E-4	45.0	5
CGGTTTT	25	3.8704733E-5	45.0	1
CGTTGAT	75	0.0	45.0	25
TAGCGGG	20	7.008741E-4	45.0	3
TTCGTGA	20	7.008741E-4	45.0	17
GGTCAAG	85	0.0	45.0	15
TATGCTT	40	6.730261E-9	45.0	37
AGGCGAT	45	3.783498E-10	45.0	7
ACGGGCT	20	7.008741E-4	45.0	5
ACGGGAA	25	3.8704733E-5	45.0	5
GCACCTA	20	7.008741E-4	45.0	36
ATCGTTG	75	0.0	45.0	23