##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934678.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 85915 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.905045684688353 31.0 31.0 34.0 30.0 34.0 2 32.09664202991328 33.0 31.0 34.0 30.0 34.0 3 31.750648897165803 33.0 31.0 34.0 30.0 34.0 4 35.63425478670779 37.0 35.0 37.0 33.0 37.0 5 31.98167956701391 37.0 35.0 37.0 0.0 37.0 6 33.923342838852356 37.0 35.0 37.0 19.0 37.0 7 20.915125414654018 32.0 0.0 37.0 0.0 37.0 8 28.219007158237794 35.0 17.0 37.0 17.0 37.0 9 34.9620089623465 37.0 32.0 39.0 32.0 39.0 10 36.360344526566955 37.0 35.0 39.0 32.0 39.0 11 36.72057265902345 39.0 35.0 39.0 33.0 39.0 12 36.90385846476168 39.0 35.0 39.0 33.0 39.0 13 36.39030437059885 39.0 35.0 39.0 32.0 39.0 14 37.72113135075365 40.0 36.0 41.0 33.0 41.0 15 38.03085607868242 40.0 36.0 41.0 33.0 41.0 16 38.1646511086539 40.0 36.0 41.0 34.0 41.0 17 38.2113600651807 40.0 36.0 41.0 34.0 41.0 18 38.086422627015075 40.0 36.0 41.0 34.0 41.0 19 37.96254437525461 40.0 36.0 41.0 34.0 41.0 20 37.893569225397194 40.0 35.0 41.0 34.0 41.0 21 37.75977419542571 39.0 35.0 41.0 34.0 41.0 22 37.67226910318338 39.0 35.0 41.0 33.0 41.0 23 37.61594599313275 39.0 35.0 41.0 33.0 41.0 24 37.502822557178604 39.0 35.0 41.0 33.0 41.0 25 37.338229645579936 39.0 35.0 41.0 33.0 41.0 26 37.20975382645638 39.0 35.0 41.0 33.0 41.0 27 37.140999825408834 39.0 35.0 41.0 33.0 41.0 28 37.118431007391024 39.0 35.0 41.0 33.0 41.0 29 37.153686783448755 39.0 35.0 41.0 33.0 41.0 30 36.99075830762963 39.0 35.0 41.0 33.0 41.0 31 36.80437641855322 39.0 35.0 40.0 32.0 41.0 32 36.62968049816679 39.0 35.0 40.0 31.0 41.0 33 36.382552522842346 39.0 35.0 40.0 31.0 41.0 34 36.16702554850725 39.0 35.0 40.0 30.0 41.0 35 35.90868882034569 38.0 35.0 40.0 30.0 41.0 36 35.66857940988186 38.0 35.0 40.0 28.0 41.0 37 35.51321655124251 38.0 35.0 40.0 27.0 41.0 38 35.395611942035735 38.0 35.0 40.0 26.0 41.0 39 35.35722516440668 38.0 35.0 40.0 26.0 41.0 40 35.227934586509924 38.0 35.0 40.0 25.0 41.0 41 35.1437350870046 38.0 35.0 40.0 24.0 41.0 42 35.031950183320724 38.0 34.0 40.0 24.0 41.0 43 34.910842111389165 38.0 34.0 40.0 23.0 41.0 44 34.72469301053367 38.0 34.0 40.0 23.0 41.0 45 34.62489670022697 38.0 34.0 40.0 23.0 41.0 46 34.49560612233021 38.0 34.0 40.0 23.0 41.0 47 34.46351626607694 38.0 34.0 40.0 23.0 41.0 48 34.425327358435666 37.0 34.0 40.0 23.0 41.0 49 34.359774195425715 37.0 34.0 40.0 22.0 41.0 50 34.13545946575103 37.0 34.0 40.0 20.0 41.0 51 32.42802770179829 35.0 31.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 5.0 10 5.0 11 5.0 12 1.0 13 0.0 14 0.0 15 1.0 16 10.0 17 12.0 18 24.0 19 46.0 20 99.0 21 191.0 22 304.0 23 497.0 24 757.0 25 1175.0 26 1480.0 27 1506.0 28 1526.0 29 1647.0 30 1864.0 31 2366.0 32 3215.0 33 5181.0 34 7154.0 35 9041.0 36 8686.0 37 14487.0 38 15307.0 39 9319.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.50648897165803 17.801315253448173 23.277658150497587 19.414537624396207 2 35.02182389571088 23.836349880696037 24.244893208403656 16.89693301518943 3 30.107664552173656 22.587441075481582 30.974800675085838 16.330093697258917 4 25.57993365535704 24.96071698772042 31.105162078798816 18.354187278123728 5 20.925333178141187 36.143863120526106 27.047663388232557 15.883140313100158 6 25.07361927486469 33.47843799103765 29.004248385031715 12.443694349065936 7 46.575103299773026 42.87493452831287 8.17319443636152 2.376767735552581 8 81.27102368620149 4.428795902927312 11.71972298201711 2.5804574288541002 9 76.47325845312227 6.483151952511203 13.101321073153699 3.9422685212128266 10 46.75667811208753 21.61438631205261 20.08380375952977 11.545131816330095 11 37.51964150613979 22.37676773555258 24.876913228190652 15.226677530116975 12 32.627597043589596 21.479369143921318 30.23220625036373 15.660827562125357 13 22.535063725775476 30.57789675842402 31.49391840772857 15.39312110807193 14 17.34272245824361 33.66932433218879 32.13292207414305 16.855031135424547 15 17.53593668160391 24.219286504102893 42.5688180178083 15.675958796484899 16 18.393761275679452 20.386428446720593 43.300936972589184 17.918873305010766 17 20.186230576732818 20.6494791363557 32.881336204388056 26.282954082523425 18 21.857650002909853 22.48967002269685 35.30000581970552 20.352674154687772 19 24.598731304196008 25.1201769190479 30.627946225920972 19.653145550835127 20 26.37141360647151 23.382412849909795 31.673165337833904 18.573008205784788 21 22.100913693767097 25.946575103299775 32.823139149159054 19.12937205377408 22 21.9717162311587 23.018099284176223 32.008380375952974 23.001804108712097 23 20.067508584065646 26.640284001629517 31.547459698539253 21.744747715765584 24 20.878775533957985 23.179887097712857 36.96793342256882 18.973403945760346 25 18.227317697724494 25.34481755223186 35.982075306989465 20.44578944305418 26 17.8758074841413 29.78641680730955 31.6440668102194 20.693708898329742 27 17.825758016644357 29.837630215911076 33.45865099225979 18.877960775184775 28 17.40091951347262 27.33050107664552 37.1739509980795 18.094628411802365 29 18.05854623756038 24.658092300529592 37.06686841645813 20.216493045451898 30 19.12937205377408 28.258162136995868 34.658674271081885 17.95379153814817 31 24.432287726241054 26.69498923354478 30.890996915556073 17.981726124658092 32 25.270325321538728 25.989640924169237 31.109817843217137 17.630215911074902 33 23.160100098934993 27.587732060757723 29.741023104230923 19.511144736076353 34 20.513298027119827 27.790257812954668 30.013385322702675 21.683058837222838 35 20.12221381598091 27.119827736716523 31.6149682826049 21.142990164697668 36 26.003608217424194 25.441424663912006 30.66286445905837 17.892102659605424 37 21.750567421288483 27.63079788162719 31.811674329278937 18.806960367805388 38 20.193214223360297 29.632776581504977 28.40016295175464 21.773846243380085 39 20.735610778094628 29.057789675842404 30.362567654076706 19.844031891986265 40 22.319734621428154 26.98946633300355 28.936739800966073 21.75405924460222 41 18.91637083163592 25.321538730140254 30.85142291800035 24.910667520223477 42 21.70633765931444 25.535703893382994 30.1169760810103 22.640982366292263 43 22.66775301169761 25.1318163300937 29.8888436245126 22.311587033696096 44 20.31077227492289 29.36623406855613 30.044811732526334 20.278181923994644 45 19.67526043182215 32.78589303381249 26.505266833498226 21.033579700867136 46 23.214805330850258 31.06209625792935 27.911307687830995 17.811790723389397 47 21.435139381947273 28.04166909154397 29.25915148693476 21.264040039574 48 22.98201710993424 26.099051387999765 30.3509282430309 20.56800325903509 49 22.03573299191061 25.290112320316595 31.20875283710644 21.465401850666357 50 20.23162427981144 29.441890240353843 29.2510038992027 21.07548158063202 51 19.98719664784962 29.353430716405747 27.917127393353898 22.742245242390734 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 107.0 1 186.5 2 266.0 3 1173.0 4 2080.0 5 1442.0 6 804.0 7 714.5 8 625.0 9 603.0 10 581.0 11 609.5 12 638.0 13 604.5 14 571.0 15 574.0 16 577.0 17 522.5 18 468.0 19 433.0 20 398.0 21 382.5 22 367.0 23 420.5 24 474.0 25 575.5 26 745.0 27 813.0 28 1029.5 29 1246.0 30 1361.0 31 1476.0 32 1634.0 33 1792.0 34 2165.5 35 2539.0 36 2795.5 37 3052.0 38 3328.5 39 3605.0 40 4426.5 41 5248.0 42 6047.5 43 6847.0 44 7106.0 45 7365.0 46 7084.0 47 6803.0 48 6620.0 49 6437.0 50 6315.0 51 6193.0 52 5804.0 53 5415.0 54 4972.0 55 4529.0 56 4043.0 57 3557.0 58 3217.0 59 2877.0 60 2636.5 61 2396.0 62 2157.0 63 1918.0 64 1535.5 65 1153.0 66 957.5 67 762.0 68 610.0 69 458.0 70 369.5 71 281.0 72 250.0 73 219.0 74 181.0 75 112.5 76 82.0 77 61.5 78 41.0 79 30.0 80 19.0 81 14.0 82 9.0 83 6.0 84 3.0 85 3.0 86 3.0 87 2.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 85915.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.88855263923646 #Duplication Level Percentage of deduplicated Percentage of total 1 69.45236737022248 31.1761624861782 2 9.33205414095317 8.378048070767619 3 5.390758699372504 7.259500669266135 4 3.6742208162630297 6.597218180760053 5 2.784836384380024 6.250363731595181 6 2.1288181299590314 5.733573881161613 7 1.643935072343515 5.165570622126521 8 1.3431519991702536 4.823371937379969 9 1.0916351190167504 4.4101728452540305 >10 3.1452574806824667 18.406564627829834 >50 0.005185915054711404 0.20252575219693883 >100 0.005185915054711404 0.730955013676308 >500 0.002592957527355702 0.8659721818076005 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 744 0.8659721818076005 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 457 0.5319210847931095 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 171 0.1990339288831985 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 95 0.1105744049351103 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03491823313740325 0.0 2 0.0 0.0 0.0 0.13152534481755224 0.0 3 0.0 0.0 0.0 0.182738753419077 0.0 4 0.0 0.0 0.0 0.24209974975266252 0.0 5 0.0 0.0 0.0 0.4225106209625793 0.0 6 0.0 0.0 0.0 0.5423965547343305 0.0 7 0.0 0.0 0.0 0.6809055461793633 0.0 8 0.0 0.0 0.0 1.0498748763312575 0.0 9 0.0 0.0 0.0 1.1569574579526276 0.0 10 0.0 0.0 0.0 1.4782052028167374 0.0 11 0.0 0.0 0.0 1.9321422336029797 0.0 12 0.0 0.0 0.0 2.36163650119304 0.0 13 0.0 0.0 0.0 2.503637315951813 0.0 14 0.0 0.0 0.0 2.5664901355991385 0.0 15 0.0 0.0 0.0 2.68870395158005 0.0 16 0.0 0.0 0.0 2.9401152301693534 0.0 17 0.0 0.0 0.0 3.2625269161380435 0.0 18 0.0 0.0 0.0 3.5849386021067335 0.0 19 0.0 0.0 0.0 3.7595297677937496 0.0 20 0.0 0.0 0.0 3.957399755572368 0.0 21 0.0 0.0 0.0 4.209974975266252 0.0 22 0.0 0.0 0.0 4.456730489437234 0.0 23 0.0 0.0 0.0 4.745387883373101 0.0 24 0.0 0.0 0.0 4.971192457661642 0.0 25 0.0 0.0 0.0 5.172554268754001 0.0 26 0.0 0.0 0.0 5.365768492114299 0.0 27 0.0 0.0 0.0 5.547343304428796 0.0 28 0.0 0.0 0.0 5.768492114299017 0.0 29 0.0 0.0 0.0 5.980329395332596 0.0 30 0.0 0.0 0.0 6.23290461502648 0.0 31 0.0 0.0 0.0 6.506430774602805 0.0 32 0.0 0.0 0.0 6.708956526799744 0.0 33 0.0 0.0 0.0 6.921957748937904 0.0 34 0.0 0.0 0.0 7.144270499912705 0.0 35 0.0 0.0 0.0 7.435255776057732 0.0 36 0.0 0.0 0.0 7.6726997613920735 0.0 37 0.0 0.0 0.0 7.926438922190537 0.0 38 0.0011639411045801082 0.0 0.0 8.183669906302741 0.0 39 0.0011639411045801082 0.0 0.0 8.453704242565326 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGCGAT 60 0.0 45.000004 7 TAGGAGA 30 2.1420474E-6 45.000004 6 CGTTTTA 115 0.0 45.000004 1 AAGGAGC 30 2.1420474E-6 45.000004 6 AGGTATT 25 3.86064E-5 45.0 7 GGGCTTA 20 6.996856E-4 45.0 8 GGCACTC 20 6.996856E-4 45.0 8 AGGACTC 20 6.996856E-4 45.0 7 AGGACTA 40 6.688424E-9 45.0 7 TGTATGG 25 3.86064E-5 45.0 2 GATCAAT 20 6.996856E-4 45.0 9 CGATTGG 20 6.996856E-4 45.0 10 CGTTATT 45 3.765308E-10 45.0 1 TAGTTGG 20 6.996856E-4 45.0 2 CGTTAGG 25 3.86064E-5 45.0 3 AGGCCTT 20 6.996856E-4 45.0 7 CCTCCGC 20 6.996856E-4 45.0 45 TAATTGT 25 3.86064E-5 45.0 36 CACTAGG 20 6.996856E-4 45.0 3 TTGCGGG 20 6.996856E-4 45.0 3 >>END_MODULE