SRR2934677.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934677.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	456413
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2412	0.5284687333621084	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1431	0.31353182315140016	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC	608	0.13321268237320147	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	538	0.11787569591576051	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGGTC	20	7.028811E-4	45.000004	5
TACGAAT	60	0.0	45.000004	12
CGAATAT	60	0.0	45.000004	14
CGCACGG	45	3.8380676E-10	45.000004	2
AATACCG	20	7.028811E-4	45.000004	1
CGTTTTA	515	0.0	42.37864	1
TTACGGG	75	0.0	42.0	3
CGTTATT	205	0.0	40.609756	1
CGTTTTT	850	0.0	40.5	1
ATTATAC	140	0.0	40.178574	42
TATGCGG	45	1.9239451E-8	40.000004	2
ATAGGCC	40	3.4521145E-7	39.375004	5
CGCATGG	40	3.4521145E-7	39.375004	2
ATAGCGG	40	3.4521145E-7	39.375004	2
TATACGG	35	6.240012E-6	38.57143	2
TCGTTGA	100	0.0	38.25	24
TTAATCG	100	0.0	38.25	20
CGTTGAT	100	0.0	38.25	25
ATAGGCG	30	1.13884365E-4	37.500004	5
ACGTTAG	30	1.13884365E-4	37.500004	2