##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934677.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 456413 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.918534309934206 31.0 31.0 34.0 30.0 34.0 2 32.10282134820875 33.0 31.0 34.0 30.0 34.0 3 31.92963390613326 33.0 31.0 34.0 30.0 34.0 4 35.721677515758756 37.0 35.0 37.0 35.0 37.0 5 32.087414249813214 37.0 35.0 37.0 10.0 37.0 6 33.92514674209543 37.0 35.0 37.0 19.0 37.0 7 20.763939677441265 32.0 0.0 37.0 0.0 37.0 8 28.05719600449593 35.0 17.0 37.0 17.0 37.0 9 34.784377307394834 37.0 32.0 39.0 32.0 39.0 10 36.208160153194584 37.0 35.0 39.0 32.0 39.0 11 36.59725511762373 38.0 35.0 39.0 32.0 39.0 12 36.89562961615905 39.0 35.0 39.0 33.0 39.0 13 36.62506983806333 39.0 35.0 39.0 33.0 39.0 14 37.86344823657521 40.0 37.0 41.0 33.0 41.0 15 38.039376617230445 40.0 37.0 41.0 33.0 41.0 16 38.16517058015438 40.0 37.0 41.0 33.0 41.0 17 38.15513580901508 40.0 37.0 41.0 33.0 41.0 18 38.04942234336007 40.0 37.0 41.0 33.0 41.0 19 37.98178185108662 40.0 37.0 41.0 33.0 41.0 20 37.94476274777449 40.0 36.0 41.0 33.0 41.0 21 37.83735783161303 40.0 36.0 41.0 33.0 41.0 22 37.84609334089958 40.0 36.0 41.0 33.0 41.0 23 37.808923058720936 40.0 36.0 41.0 33.0 41.0 24 37.66665279034559 39.0 35.0 41.0 33.0 41.0 25 37.524792238608455 39.0 35.0 41.0 33.0 41.0 26 37.388722494758035 39.0 35.0 41.0 33.0 41.0 27 37.34974463917548 39.0 35.0 41.0 33.0 41.0 28 37.25004765420792 39.0 35.0 41.0 32.0 41.0 29 37.209455033051206 39.0 35.0 41.0 32.0 41.0 30 37.00663215114381 39.0 35.0 41.0 32.0 41.0 31 36.84620069980478 39.0 35.0 41.0 31.0 41.0 32 36.738114383245 39.0 35.0 41.0 31.0 41.0 33 36.554158185678325 39.0 35.0 40.0 30.0 41.0 34 36.32338693244934 39.0 35.0 40.0 30.0 41.0 35 36.158796966782276 39.0 35.0 40.0 29.0 41.0 36 35.96904777033082 39.0 35.0 40.0 29.0 41.0 37 35.919702111903035 39.0 35.0 40.0 29.0 41.0 38 35.691961008998426 38.0 35.0 40.0 27.0 41.0 39 35.57712203640124 38.0 35.0 40.0 27.0 41.0 40 35.40560194385348 38.0 34.0 40.0 26.0 41.0 41 35.24673924712924 38.0 34.0 40.0 26.0 41.0 42 35.19010194713998 38.0 34.0 40.0 26.0 41.0 43 35.140729996735416 38.0 34.0 40.0 25.0 41.0 44 34.99735108333899 38.0 34.0 40.0 25.0 41.0 45 34.89860499153179 38.0 34.0 40.0 24.0 41.0 46 34.73433491158227 38.0 34.0 40.0 24.0 41.0 47 34.64788031892168 37.0 34.0 40.0 24.0 41.0 48 34.49844329587457 37.0 33.0 40.0 23.0 41.0 49 34.38849024896311 37.0 33.0 40.0 23.0 41.0 50 34.207198305043896 37.0 33.0 40.0 23.0 41.0 51 32.25294415365031 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 10.0 9 20.0 10 20.0 11 18.0 12 9.0 13 11.0 14 17.0 15 27.0 16 56.0 17 117.0 18 199.0 19 341.0 20 627.0 21 1028.0 22 1686.0 23 2506.0 24 3603.0 25 5002.0 26 6116.0 27 7084.0 28 7919.0 29 8826.0 30 10817.0 31 13540.0 32 18170.0 33 25972.0 34 34479.0 35 42728.0 36 54006.0 37 83562.0 38 79416.0 39 48471.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.16488136840975 18.168851456904164 22.015367660430357 17.65089951425573 2 32.520984283970876 24.474105689364674 25.679154625306467 17.32575540135798 3 32.21292995598285 24.24974748747297 27.337301961162368 16.200020595381815 4 27.95056231965347 25.253662801015746 28.350419466579613 18.445355412751173 5 22.75548680690515 36.39642166195967 24.0356869764884 16.81240455464678 6 26.108152046501743 34.294378118064124 26.194039170663412 13.403430664770724 7 49.23829952258152 42.57240700856461 5.8039538751087285 2.3853395937451385 8 84.57690731859083 4.37717593495365 8.289641180246837 2.756275566208675 9 79.32377035711077 5.8330941493778665 10.00037246967111 4.8427630238402495 10 44.42314307436466 24.83693496898642 17.385788748348535 13.354133208300379 11 33.18880049428916 25.252129102370002 23.93709206354771 17.621978339793127 12 29.65340601604249 22.1023502836247 28.693748863419756 19.55049483691306 13 25.93287220127385 23.61874004465254 30.75788814078477 19.690499613288843 14 22.47569635396012 24.566127608109323 31.102532136464124 21.855643901466433 15 20.482326314105865 25.490509691879943 33.30645709039839 20.720706903615806 16 26.089528562946278 24.31985942556413 29.713439363033046 19.87717264845655 17 26.395610992675493 23.877277816363687 27.94727582255545 21.77983536840537 18 26.093910559076978 23.739902237666325 29.192639122899656 20.973548080357045 19 26.252757918814755 25.542217246222172 25.952591183861983 22.252433651101086 20 27.468980944889825 26.524660778724535 27.032095930659295 18.97426234572635 21 26.23654453313118 26.11121944379323 28.867056810388835 18.785179212686757 22 26.437020856110582 22.411719210451935 29.174892038570334 21.97636789486715 23 25.994439246910144 24.389971363655285 28.769776496287353 20.845812893147215 24 24.213376919588182 23.416072723607783 30.10277971924551 22.267770637558527 25 24.127270695619977 25.054939276488618 27.706923334786694 23.110866693104708 26 23.39306724392162 24.914934500112835 27.98014079353568 23.71185746242986 27 22.716925240955014 24.64566083788148 29.78026480402618 22.85714911713733 28 20.926222522145512 26.77859745449845 28.35392506348417 23.94125495987187 29 24.273848466191804 25.67784002646726 27.518497501166706 22.52981400617423 30 25.308875952262532 24.883384127971812 28.306161305659565 21.501578614106084 31 25.413605659786203 25.01506311169927 27.748333198221786 21.82299803029274 32 26.917944931454624 24.0074231014454 27.487823528251827 21.58680843884815 33 25.55251493712931 24.282831558259733 28.65672099611536 21.507932508495596 34 22.902940976703118 24.49820666808351 30.95880266337725 21.640049691836122 35 23.765098715417835 26.13225302522058 29.13172937668296 20.970918882678628 36 25.011557514794713 27.478402236570826 27.014129746523434 20.495910502111027 37 24.549476022812673 26.989809667998067 27.825675429928598 20.63503887926067 38 24.47651578723656 26.48368911490251 27.624541807529585 21.415253290331346 39 24.770985927219428 25.497520885689056 27.288661804111626 22.44283138297989 40 26.292414983797567 24.12507969755463 28.640069410818707 20.942435907829093 41 21.624931805185216 25.073562760044084 28.839231134958908 24.462274299811792 42 22.12754676137621 24.976063346136065 29.40648053407769 23.489909358410035 43 22.7771776877521 24.699559390289057 29.259245464086252 23.264017457872583 44 23.089394912064293 24.54618952571465 29.04189845600366 23.322517106217393 45 23.010738081518273 24.538740132292464 28.101302986549463 24.3492187996398 46 23.75502012431723 25.657025544846444 27.032315030465824 23.555639300370498 47 22.087013297167257 25.963327074382192 28.88830949162272 23.06135013682783 48 21.940654626401965 25.868018658539526 29.093825110152427 23.097501604906082 49 23.43162880987176 25.020102407249574 28.478592853402514 23.069675929476155 50 21.891138070125084 25.91008582139422 28.941988944223763 23.256787164256934 51 21.67401016184903 25.505408478724313 28.01256756490284 24.80801379452382 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 222.0 1 633.5 2 1045.0 3 3948.5 4 6852.0 5 4500.5 6 2149.0 7 1866.5 8 1584.0 9 1517.5 10 1451.0 11 1437.5 12 1424.0 13 1424.0 14 1424.0 15 1385.5 16 1347.0 17 1326.5 18 1306.0 19 1327.0 20 1348.0 21 1447.5 22 1547.0 23 1804.5 24 2062.0 25 2480.0 26 3509.5 27 4121.0 28 5038.5 29 5956.0 30 6779.5 31 7603.0 32 8659.0 33 9715.0 34 11090.0 35 12465.0 36 13331.5 37 14198.0 38 15212.5 39 16227.0 40 18000.0 41 19773.0 42 20983.0 43 22193.0 44 23715.0 45 25237.0 46 28081.0 47 30925.0 48 31227.5 49 31530.0 50 32177.0 51 32824.0 52 32719.5 53 32615.0 54 31572.0 55 30529.0 56 29339.0 57 28149.0 58 26904.5 59 25660.0 60 23803.5 61 21947.0 62 19779.0 63 17611.0 64 15518.0 65 13425.0 66 11489.0 67 9553.0 68 7990.0 69 6427.0 70 5373.5 71 4320.0 72 3591.5 73 2863.0 74 2336.5 75 1430.5 76 1051.0 77 793.0 78 535.0 79 384.0 80 233.0 81 180.0 82 127.0 83 89.5 84 52.0 85 48.5 86 45.0 87 29.5 88 14.0 89 14.0 90 14.0 91 9.5 92 5.0 93 2.5 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 456413.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.906767451151964 #Duplication Level Percentage of deduplicated Percentage of total 1 70.75991447796807 33.19118853281449 2 9.752225168472346 9.148907162176073 3 5.2520425149895935 7.390690106825404 4 3.479019312428153 6.527581993845359 5 2.5770412150580286 6.044033649338052 6 1.9651283376671855 5.53066907679741 7 1.4651788398675065 4.810876218120963 8 1.189061877691684 4.462003918553114 9 0.8809344116206661 3.718960702704717 >10 2.647176113379337 16.387355095876615 >50 0.01866056315196044 0.6103489936195808 >100 0.01159980952687294 0.9971399256213052 >500 0.001008679089293299 0.2711085064678566 >1k 0.001008679089293299 0.909136117239069 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2412 0.5284687333621084 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1431 0.31353182315140016 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAGTTACTCGTATGCCGTCTTC 608 0.13321268237320147 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 538 0.11787569591576051 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1909980653487084E-4 0.0 0.0 0.02081448162081273 0.0 2 2.1909980653487084E-4 0.0 0.0 0.10998810288050516 0.0 3 2.1909980653487084E-4 0.0 0.0 0.15139796631559574 0.0 4 2.1909980653487084E-4 0.0 0.0 0.2329030943465677 0.0 5 2.1909980653487084E-4 0.0 0.0 0.5409574223345961 0.0 6 2.1909980653487084E-4 0.0 0.0 0.7613718277086762 0.0 7 2.1909980653487084E-4 0.0 0.0 0.9655728473991757 0.0 8 2.1909980653487084E-4 0.0 0.0 1.3985140651120804 0.0 9 2.1909980653487084E-4 0.0 0.0 1.6465350461095543 0.0 10 2.1909980653487084E-4 0.0 0.0 2.2302169307184503 0.0 11 2.1909980653487084E-4 0.0 0.0 2.6642536474640295 0.0 12 2.1909980653487084E-4 0.0 0.0 3.07046468877968 0.0 13 2.1909980653487084E-4 0.0 0.0 3.235008643487368 0.0 14 2.1909980653487084E-4 0.0 0.0 3.3355754546868734 0.0 15 2.1909980653487084E-4 0.0 0.0 3.461557843444424 0.0 16 2.1909980653487084E-4 0.0 0.0 3.656994870873529 0.0 17 2.1909980653487084E-4 0.0 0.0 3.865796986501261 0.0 18 2.1909980653487084E-4 0.0 0.0 4.115132566337944 0.0 19 2.1909980653487084E-4 0.0 0.0 4.263244035555517 0.0 20 2.1909980653487084E-4 0.0 0.0 4.429102589102413 0.0 21 2.1909980653487084E-4 0.0 0.0 4.629359812275286 0.0 22 2.1909980653487084E-4 0.0 0.0 4.8429821236467845 0.0 23 2.1909980653487084E-4 0.0 0.0 5.058576333277098 0.0 24 2.1909980653487084E-4 0.0 0.0 5.235828076763808 0.0 25 2.1909980653487084E-4 0.0 0.0 5.40322032895645 0.0 26 2.1909980653487084E-4 0.0 0.0 5.568859782696812 0.0 27 2.1909980653487084E-4 0.0 0.0 5.763420410899777 0.0 28 2.1909980653487084E-4 0.0 0.0 5.951627144713231 0.0 29 2.1909980653487084E-4 0.0 0.0 6.1492551702076845 0.0 30 2.1909980653487084E-4 0.0 0.0 6.453365701678085 0.0 31 2.1909980653487084E-4 0.0 0.0 6.671150909373747 0.0 32 2.1909980653487084E-4 0.0 0.0 6.966716548389288 0.0 33 2.1909980653487084E-4 0.0 0.0 7.188007352989508 0.0 34 2.1909980653487084E-4 0.0 0.0 7.413899253526959 0.0 35 2.1909980653487084E-4 0.0 0.0 7.667397729687805 0.0 36 2.1909980653487084E-4 0.0 0.0 7.883868338544257 0.0 37 2.1909980653487084E-4 0.0 0.0 8.126630924184894 0.0 38 2.1909980653487084E-4 0.0 0.0 8.406859576742994 0.0 39 2.1909980653487084E-4 0.0 0.0 8.84659288845848 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGGTC 20 7.028811E-4 45.000004 5 TACGAAT 60 0.0 45.000004 12 CGAATAT 60 0.0 45.000004 14 CGCACGG 45 3.8380676E-10 45.000004 2 AATACCG 20 7.028811E-4 45.000004 1 CGTTTTA 515 0.0 42.37864 1 TTACGGG 75 0.0 42.0 3 CGTTATT 205 0.0 40.609756 1 CGTTTTT 850 0.0 40.5 1 ATTATAC 140 0.0 40.178574 42 TATGCGG 45 1.9239451E-8 40.000004 2 ATAGGCC 40 3.4521145E-7 39.375004 5 CGCATGG 40 3.4521145E-7 39.375004 2 ATAGCGG 40 3.4521145E-7 39.375004 2 TATACGG 35 6.240012E-6 38.57143 2 TCGTTGA 100 0.0 38.25 24 TTAATCG 100 0.0 38.25 20 CGTTGAT 100 0.0 38.25 25 ATAGGCG 30 1.13884365E-4 37.500004 5 ACGTTAG 30 1.13884365E-4 37.500004 2 >>END_MODULE