SRR2934676.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934676.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	159463
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1759	1.103077202862106	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1020	0.6396468146215737	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	396	0.2483334692060227	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	302	0.18938562550560317	No Hit
GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	256	0.16053880837561063	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTATG	30	2.1537144E-6	45.000004	7
ATAGGAT	45	3.8016879E-10	45.000004	5
CTAAGGC	35	1.2031524E-7	45.000004	4
ACTTTCG	30	2.1537144E-6	45.000004	14
TTGATTC	80	0.0	45.0	43
CCCTAGC	25	3.875658E-5	45.0	21
GTTAGCC	20	7.015002E-4	45.0	16
GATCACT	25	3.875658E-5	45.0	16
GCGCAAC	25	3.875658E-5	45.0	21
TGGCACC	20	7.015002E-4	45.0	16
CATAGGT	20	7.015002E-4	45.0	4
AGGTTCA	20	7.015002E-4	45.0	7
CAAGGTA	20	7.015002E-4	45.0	5
GCCTAGG	25	3.875658E-5	45.0	3
GTCCCGC	20	7.015002E-4	45.0	15
CAACTCT	20	7.015002E-4	45.0	14
GTGCGCA	25	3.875658E-5	45.0	19
CAGAGCC	20	7.015002E-4	45.0	4
AATACGA	20	7.015002E-4	45.0	27
GCCGTAC	20	7.015002E-4	45.0	45