SRR2934675.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934675.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	341268
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1537	0.45037917413879996	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	865	0.25346648381916853	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	342	0.10021449418052675	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGTT	30	2.1609994E-6	45.000004	27
TCGACGT	30	2.1609994E-6	45.000004	26
TTCGACG	30	2.1609994E-6	45.000004	25
CGACGGT	20	7.026309E-4	45.0	28
ACGTTCC	20	7.026309E-4	45.0	17
CACGACG	20	7.026309E-4	45.0	26
CGTAGCC	20	7.026309E-4	45.0	16
CTTGCGA	20	7.026309E-4	45.0	1
ATAAGGT	40	6.7902874E-9	45.0	4
GTCTTCG	20	7.026309E-4	45.0	32
CACCGGA	20	7.026309E-4	45.0	31
ACGACGG	20	7.026309E-4	45.0	27
CACGCCG	50	2.1827873E-11	44.999996	26
GCGATAT	50	2.1827873E-11	44.999996	9
CATCGTT	25	3.8850234E-5	44.999996	36
CGATATC	25	3.8850234E-5	44.999996	10
TGGTCGG	25	3.8850234E-5	44.999996	45
CGAAGGA	90	0.0	42.500004	4
GCGAGAC	80	0.0	42.1875	21
ACACGAC	80	0.0	42.1875	26