##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934675.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 341268 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.936416540665988 31.0 31.0 34.0 30.0 34.0 2 32.12480513848354 33.0 31.0 34.0 30.0 34.0 3 31.962618821571315 33.0 31.0 34.0 30.0 34.0 4 35.76004196115663 37.0 35.0 37.0 35.0 37.0 5 32.0483901215467 37.0 35.0 37.0 0.0 37.0 6 33.95389254193186 37.0 35.0 37.0 19.0 37.0 7 20.860376595520236 32.0 0.0 37.0 0.0 37.0 8 28.172864141964673 35.0 17.0 37.0 17.0 37.0 9 34.91242073678165 37.0 32.0 39.0 32.0 39.0 10 36.15114221081379 37.0 35.0 39.0 32.0 39.0 11 36.57902879848096 38.0 35.0 39.0 32.0 39.0 12 36.97187547616536 39.0 37.0 39.0 33.0 39.0 13 36.76688116084719 39.0 37.0 39.0 33.0 39.0 14 38.17179167106204 40.0 37.0 41.0 33.0 41.0 15 38.3502350059191 40.0 38.0 41.0 34.0 41.0 16 38.41105524104223 40.0 38.0 41.0 34.0 41.0 17 38.36580634574587 40.0 37.0 41.0 34.0 41.0 18 38.29180292321577 40.0 37.0 41.0 34.0 41.0 19 38.22352520599646 40.0 37.0 41.0 34.0 41.0 20 38.20355849361792 40.0 37.0 41.0 34.0 41.0 21 38.12762403741341 40.0 37.0 41.0 34.0 41.0 22 38.10621271258952 40.0 37.0 41.0 34.0 41.0 23 38.04538661696965 40.0 37.0 41.0 34.0 41.0 24 37.92403917156018 40.0 36.0 41.0 33.0 41.0 25 37.806747189891816 40.0 36.0 41.0 33.0 41.0 26 37.66541252036522 40.0 36.0 41.0 33.0 41.0 27 37.627465804001545 40.0 36.0 41.0 33.0 41.0 28 37.569898144566736 40.0 36.0 41.0 33.0 41.0 29 37.56355415685034 40.0 36.0 41.0 33.0 41.0 30 37.399958390473174 40.0 36.0 41.0 33.0 41.0 31 37.26325058311942 39.0 35.0 41.0 32.0 41.0 32 37.15080816249986 39.0 35.0 41.0 32.0 41.0 33 36.97951463366035 39.0 35.0 41.0 31.0 41.0 34 36.837555821231405 39.0 35.0 41.0 31.0 41.0 35 36.661497708545774 39.0 35.0 41.0 30.0 41.0 36 36.49477829740849 39.0 35.0 41.0 30.0 41.0 37 36.40418380861962 39.0 35.0 41.0 30.0 41.0 38 36.2982992838473 39.0 35.0 41.0 30.0 41.0 39 36.25101972643201 39.0 35.0 41.0 30.0 41.0 40 36.17810342604639 39.0 35.0 41.0 29.0 41.0 41 36.076080968622904 39.0 35.0 40.0 29.0 41.0 42 35.932780102441484 39.0 35.0 40.0 28.0 41.0 43 35.79722095244793 39.0 35.0 40.0 27.0 41.0 44 35.649032431988935 39.0 35.0 40.0 27.0 41.0 45 35.52173951264109 38.0 35.0 40.0 26.0 41.0 46 35.36516462135331 38.0 34.0 40.0 26.0 41.0 47 35.311122050705016 38.0 34.0 40.0 26.0 41.0 48 35.22035174701408 38.0 34.0 40.0 25.0 41.0 49 35.078422237068814 38.0 34.0 40.0 24.0 41.0 50 34.92520248016222 38.0 34.0 40.0 24.0 41.0 51 33.05888041070361 36.0 31.0 39.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 11.0 9 12.0 10 16.0 11 12.0 12 2.0 13 4.0 14 4.0 15 12.0 16 23.0 17 45.0 18 82.0 19 171.0 20 329.0 21 532.0 22 995.0 23 1582.0 24 2382.0 25 3113.0 26 4075.0 27 4444.0 28 5054.0 29 5691.0 30 6905.0 31 8936.0 32 11736.0 33 17706.0 34 24083.0 35 30440.0 36 37797.0 37 64503.0 38 67074.0 39 43489.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.75261671179249 18.4576344690976 21.870787767971215 16.918961051138695 2 31.79583201472157 23.95448738235053 26.14279686346215 18.106883739465758 3 32.25236471043286 23.227199737449748 27.872815499841767 16.64762005227563 4 27.503897230329244 25.898707174420103 27.81186633379045 18.7855292614602 5 21.970123187641384 38.21278291547991 23.71918843841204 16.09790545846666 6 26.296927927611147 36.0186129376326 25.44129540419846 12.243163730557802 7 50.13010302753261 42.27879555071088 5.435317697528042 2.1557837242284656 8 85.72910439888885 3.889318658649507 7.869475016702415 2.512101925759227 9 80.18214423854566 6.04041398548941 9.637000832190537 4.1404409437743945 10 39.9770854577634 27.609386171571902 18.986251274658038 13.427277096006657 11 30.030943422764512 25.44979312446523 27.211751468054434 17.307511984715823 12 27.428882872112244 23.470703376818218 30.358252165453543 18.742161585615996 13 23.08684084062965 26.461314861047626 31.366550628831302 19.085293669491428 14 19.744892577094834 27.94109028681271 31.60976124336299 20.704255892729467 15 20.19439267672328 26.403588968200946 35.20546901555376 18.196549339522015 16 22.758066973756698 24.755910310957958 32.93394048079515 19.552082234490197 17 22.208352379947723 25.169368355661824 30.700798199655406 21.921481064735048 18 22.80876027052053 24.482518138237396 32.61337130935218 20.095350281889893 19 23.246539376677568 27.129997538591372 29.098831416950897 20.52463166778016 20 24.414243351266453 26.09415474055581 30.682630659774723 18.808971248403015 21 23.719481463248826 26.846056471746543 30.669151517282607 18.765310547722024 22 23.02764982359905 24.57013256443616 30.46139690800192 21.940820703962867 23 21.762368578360704 26.363151540724594 30.74211470164211 21.132365179272593 24 21.069364839363786 24.59679782458361 33.91586670886224 20.41797062719036 25 20.677590632582017 25.984270426761373 31.990107481510133 21.348031459146476 26 20.374016901672586 27.942555410996633 30.999097483502702 20.68433020382808 27 20.340026020605507 28.20422659024579 30.937269242941028 20.518478146207674 28 19.44864446710503 27.5285113166192 32.07127536129962 20.951568854976145 29 20.350281889892987 26.308062871408982 31.55203535051631 21.789619888181722 30 20.927540818359763 27.12443006669245 31.57811456099019 20.369914553957592 31 22.85535121956937 26.320955964227526 29.82318881348383 21.00050400271927 32 22.5031353657536 26.658520576204037 29.787146758559256 21.051197299483103 33 21.94785330004571 26.735586108278536 29.23450191638243 22.082058675293318 34 20.180620509394377 27.227574809240828 30.285875030767606 22.305929650597182 35 21.23082152443241 26.541603666326758 30.62197451856019 21.605600290680638 36 22.347832202257464 27.651581748068963 29.372809639345032 20.62777641032854 37 20.978820164797167 27.88336439396603 30.46344808185942 20.67436735937738 38 20.40449148469824 28.791155338326472 28.79936003375646 22.00499314321882 39 20.534594512230857 28.101374872534198 29.579392149278572 21.784638465956373 40 21.92382526342933 25.506932967638335 29.867142539001605 22.702099229930727 41 19.315611191204564 25.73109696777899 30.26536329219265 24.6879285488238 42 20.55686439982653 25.577551953303562 29.390684154388925 24.474899492480983 43 21.126797707373676 26.140452664767867 29.266148598755233 23.466601029103227 44 20.119085293669492 27.029783044410845 29.25413458044704 23.596997081472626 45 20.632171782880317 28.007606924762946 28.39293458513544 22.967286707221305 46 21.058815945239516 27.944899609690914 28.489925806111327 22.506358638958236 47 19.671636367898543 27.019820199960147 30.298768123586157 23.009775308555152 48 20.582650585463625 26.18206219159136 30.679407386570084 22.55587983637493 49 20.70718614109732 25.947349297326443 30.294372751034377 23.051091810541863 50 19.58343589202621 26.756390871690282 30.259502795456942 23.400670440826566 51 19.60511972994831 26.915796382901412 29.257650878488462 24.221433008661812 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 165.0 1 495.0 2 825.0 3 2660.5 4 4496.0 5 3058.0 6 1620.0 7 1419.0 8 1218.0 9 1172.0 10 1126.0 11 1154.5 12 1183.0 13 1167.5 14 1152.0 15 1134.0 16 1116.0 17 1142.5 18 1169.0 19 1314.0 20 1459.0 21 1529.0 22 1599.0 23 1910.5 24 2222.0 25 2488.0 26 3556.0 27 4358.0 28 5150.5 29 5943.0 30 6687.5 31 7432.0 32 8780.5 33 10129.0 34 11081.5 35 12034.0 36 13026.0 37 14018.0 38 15226.5 39 16435.0 40 18286.5 41 20138.0 42 21781.0 43 23424.0 44 24586.5 45 25749.0 46 26262.0 47 26775.0 48 26607.0 49 26439.0 50 25318.0 51 24197.0 52 22348.0 53 20499.0 54 19034.5 55 17570.0 56 16347.0 57 15124.0 58 14012.0 59 12900.0 60 12077.0 61 11254.0 62 9951.0 63 8648.0 64 7331.0 65 6014.0 66 4980.5 67 3947.0 68 3161.0 69 2375.0 70 1885.0 71 1395.0 72 1213.0 73 1031.0 74 846.5 75 513.0 76 364.0 77 263.5 78 163.0 79 114.5 80 66.0 81 51.5 82 37.0 83 27.5 84 18.0 85 13.0 86 8.0 87 9.0 88 10.0 89 5.5 90 1.0 91 3.0 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 341268.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.77275704261516 #Duplication Level Percentage of deduplicated Percentage of total 1 70.99242816766488 30.365418818808386 2 8.620181009296857 7.37417815948039 3 4.422371912258369 5.674711180653379 4 3.121268114824104 5.340209709609313 5 2.397258013410226 5.126866728802894 6 1.954511254525565 5.015990101612737 7 1.6033513682762457 4.8005830970457115 8 1.3254314624294388 4.535388633530599 9 1.0605744829255535 4.08273252153947 >10 4.482514691120758 26.335577836136494 >50 0.016642364083836736 0.44401007248846747 >100 0.002080295510479592 0.19190014488980525 >500 6.934318368265306E-4 0.25655892632099153 >1k 6.934318368265306E-4 0.4558740690813457 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1537 0.45037917413879996 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 865 0.25346648381916853 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 342 0.10021449418052675 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03164668237279792 0.0 2 0.0 0.0 0.0 0.15149384061793078 0.0 3 0.0 0.0 0.0 0.20013596352426832 0.0 4 0.0 0.0 0.0 0.2637223531066493 0.0 5 0.0 0.0 0.0 0.4623931924469918 0.0 6 0.0 0.0 0.0 0.6314685232720325 0.0 7 0.0 0.0 0.0 0.7970275560556512 0.0 8 0.0 0.0 0.0 1.2233786935780677 0.0 9 0.0 0.0 0.0 1.3552398701313924 0.0 10 0.0 0.0 0.0 1.8246656586612282 0.0 11 0.0 0.0 0.0 2.380533774042688 0.0 12 0.0 0.0 0.0 2.835308320733265 0.0 13 0.0 0.0 0.0 2.997351055475462 0.0 14 0.0 0.0 0.0 3.0732444882028203 0.0 15 0.0 0.0 0.0 3.228254626862173 0.0 16 0.0 0.0 0.0 3.576075108126165 0.0 17 0.0 0.0 0.0 4.001547171138226 0.0 18 0.0 0.0 0.0 4.499103343999438 0.0 19 0.0 0.0 0.0 4.784509535028189 0.0 20 0.0 0.0 0.0 5.0687436267098 0.0 21 0.0 0.0 0.0 5.4578806099605 0.0 22 0.0 0.0 0.0 5.8549292638044 0.0 23 0.0 0.0 0.0 6.312341034026044 0.0 24 0.0 0.0 0.0 6.65019867083934 0.0 25 0.0 0.0 0.0 6.968130618751245 0.0 26 0.0 0.0 0.0 7.256467058147849 0.0 27 0.0 0.0 0.0 7.554180292321577 0.0 28 0.0 0.0 0.0 7.8501353774745946 0.0 29 0.0 0.0 0.0 8.146969537137968 0.0 30 0.0 0.0 0.0 8.492738844544464 0.0 31 0.0 0.0 0.0 8.827080183316339 0.0 32 0.0 0.0 0.0 9.171384366538907 0.0 33 0.0 0.0 0.0 9.514809475251122 0.0 34 0.0 0.0 0.0 9.852667112064418 0.0 35 0.0 0.0 0.0 10.20839926392161 0.0 36 0.0 0.0 0.0 10.564131415778801 0.0 37 0.0 0.0 0.0 10.937445057843103 0.0 38 0.0 0.0 0.0 11.306363327355626 0.0 39 0.0 0.0 0.0 11.644513989005707 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGTT 30 2.1609994E-6 45.000004 27 TCGACGT 30 2.1609994E-6 45.000004 26 TTCGACG 30 2.1609994E-6 45.000004 25 CGACGGT 20 7.026309E-4 45.0 28 ACGTTCC 20 7.026309E-4 45.0 17 CACGACG 20 7.026309E-4 45.0 26 CGTAGCC 20 7.026309E-4 45.0 16 CTTGCGA 20 7.026309E-4 45.0 1 ATAAGGT 40 6.7902874E-9 45.0 4 GTCTTCG 20 7.026309E-4 45.0 32 CACCGGA 20 7.026309E-4 45.0 31 ACGACGG 20 7.026309E-4 45.0 27 CACGCCG 50 2.1827873E-11 44.999996 26 GCGATAT 50 2.1827873E-11 44.999996 9 CATCGTT 25 3.8850234E-5 44.999996 36 CGATATC 25 3.8850234E-5 44.999996 10 TGGTCGG 25 3.8850234E-5 44.999996 45 CGAAGGA 90 0.0 42.500004 4 GCGAGAC 80 0.0 42.1875 21 ACACGAC 80 0.0 42.1875 26 >>END_MODULE