SRR2934672.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934672.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	274053
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	808	0.2948334811149668	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	488	0.17806774601993045	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTAAG	20	7.023874E-4	45.000004	2
CCCCATA	20	7.023874E-4	45.000004	32
AGTAGCG	20	7.023874E-4	45.000004	1
GGCGTAG	25	3.8830072E-5	45.0	1
ATAGCGG	25	3.8830072E-5	45.0	2
CGAATAT	25	3.8830072E-5	45.0	14
GCTACGA	25	3.8830072E-5	45.0	10
AGCTACG	25	3.8830072E-5	45.0	9
AGCGACT	55	6.002665E-11	40.909092	19
TTACGGG	50	1.0750227E-9	40.5	3
GGCCGAT	40	3.4453842E-7	39.375004	8
CGACCAA	80	0.0	39.375004	29
GTCAAGC	80	0.0	39.375004	16
ACGACCA	80	0.0	39.375004	28
TAGCGGG	115	0.0	39.130432	3
CACGGGC	35	6.23089E-6	38.571426	4
CACGAGG	35	6.23089E-6	38.571426	3
CGTTATT	70	0.0	38.571426	1
GCAATCG	35	6.23089E-6	38.571426	21
CAATCGG	35	6.23089E-6	38.571426	22