##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934672.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 274053 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0525664743681 33.0 31.0 34.0 30.0 34.0 2 32.24370468486023 33.0 31.0 34.0 30.0 34.0 3 32.1293253494762 33.0 31.0 34.0 30.0 34.0 4 35.884463954052684 37.0 35.0 37.0 35.0 37.0 5 32.16405585780853 37.0 35.0 37.0 0.0 37.0 6 34.01516130091625 37.0 35.0 37.0 19.0 37.0 7 20.645911557253523 32.0 0.0 37.0 0.0 37.0 8 28.038332001474167 35.0 17.0 37.0 17.0 37.0 9 34.891732621062346 37.0 32.0 39.0 32.0 39.0 10 36.2705133678522 37.0 35.0 39.0 32.0 39.0 11 36.689592888966736 38.0 35.0 39.0 33.0 39.0 12 37.017624328140904 39.0 37.0 39.0 34.0 39.0 13 36.806427953716984 39.0 37.0 39.0 33.0 39.0 14 38.12948590236195 40.0 38.0 41.0 33.0 41.0 15 38.32153999408874 40.0 38.0 41.0 34.0 41.0 16 38.4272896118634 40.0 38.0 41.0 34.0 41.0 17 38.40934052902176 40.0 38.0 41.0 34.0 41.0 18 38.30220066921362 40.0 37.0 41.0 34.0 41.0 19 38.26277763790216 40.0 37.0 41.0 34.0 41.0 20 38.23832616318741 40.0 37.0 41.0 34.0 41.0 21 38.142622047560145 40.0 37.0 41.0 34.0 41.0 22 38.14177184705148 40.0 37.0 41.0 34.0 41.0 23 38.04978963923037 40.0 37.0 41.0 34.0 41.0 24 37.93465132656822 40.0 36.0 41.0 33.0 41.0 25 37.78325725315906 40.0 36.0 41.0 33.0 41.0 26 37.64477674026557 40.0 36.0 41.0 33.0 41.0 27 37.61959183077726 40.0 36.0 41.0 33.0 41.0 28 37.54180395762863 40.0 36.0 41.0 33.0 41.0 29 37.50000912232306 40.0 36.0 41.0 33.0 41.0 30 37.33419083170044 40.0 36.0 41.0 33.0 41.0 31 37.22175272666236 40.0 35.0 41.0 32.0 41.0 32 37.10769084812062 39.0 35.0 41.0 32.0 41.0 33 36.98086866409052 39.0 35.0 41.0 31.0 41.0 34 36.81480954413927 39.0 35.0 41.0 31.0 41.0 35 36.68072234202873 39.0 35.0 41.0 30.0 41.0 36 36.53024414985423 39.0 35.0 41.0 30.0 41.0 37 36.4533466154357 39.0 35.0 41.0 30.0 41.0 38 36.32315282080474 39.0 35.0 41.0 30.0 41.0 39 36.208780783279146 39.0 35.0 41.0 29.0 41.0 40 36.07836805289488 39.0 35.0 41.0 29.0 41.0 41 35.95127584810238 39.0 35.0 40.0 28.0 41.0 42 35.854659500169674 39.0 35.0 40.0 28.0 41.0 43 35.77256589053942 39.0 35.0 40.0 28.0 41.0 44 35.622372314844206 38.0 35.0 40.0 27.0 41.0 45 35.53085352103425 38.0 35.0 40.0 27.0 41.0 46 35.446121735576696 38.0 34.0 40.0 27.0 41.0 47 35.39787194447789 38.0 34.0 40.0 27.0 41.0 48 35.259756324506576 38.0 34.0 40.0 26.0 41.0 49 35.17007294209514 38.0 34.0 40.0 26.0 41.0 50 34.99807701430015 38.0 34.0 40.0 26.0 41.0 51 33.27859574607832 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 16.0 10 8.0 11 11.0 12 5.0 13 6.0 14 6.0 15 15.0 16 39.0 17 55.0 18 121.0 19 167.0 20 354.0 21 575.0 22 828.0 23 1419.0 24 1880.0 25 2670.0 26 3049.0 27 3387.0 28 3815.0 29 4461.0 30 5301.0 31 6835.0 32 9165.0 33 13478.0 34 18939.0 35 24124.0 36 31928.0 37 52819.0 38 54122.0 39 34448.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.335435116565044 18.544952983546978 23.21704195903712 16.902569940850857 2 31.481501753310493 24.294570758211005 26.596315311271905 17.627612177206597 3 32.10108993515853 23.889904507522267 27.563646447949846 16.445359109369356 4 28.055157214115518 26.12961726381393 27.33449369282584 18.48073182924471 5 22.168704593637 37.81896202559359 23.53595837301544 16.476375007753973 6 26.21098838545829 35.51393343623314 24.735726301116937 13.539351877191638 7 50.22714584405207 43.154791226514575 4.582690209558005 2.0353727198753524 8 87.79652111088001 3.597114426771464 6.511514196159138 2.0948502661893866 9 82.2497838009436 5.893020693077617 8.351304309750304 3.5058911962284665 10 42.32320025688462 28.85901632166041 15.9341441254064 12.883639296048575 11 31.46727092934578 26.456561322080034 24.726239085140467 17.349928663433715 12 28.590090238019656 23.94171930247069 28.562358375934583 18.905832083575074 13 24.84811332114591 25.600522526664548 30.111328830554672 19.440035321634866 14 21.79651381302157 26.982736915852044 30.550295015927574 20.670454255198813 15 20.61316606641781 26.07561311133248 33.45958628440484 19.85163453784487 16 25.268834860410212 24.67916789818028 30.92941876206427 19.122578479345236 17 25.59906295497586 24.44125771292414 28.90718218738711 21.052497144712884 18 25.838067818998518 24.273042075802856 29.348337730293046 20.540552374905584 19 25.49725782968988 26.23762556877684 27.689534506099182 20.575582095434093 20 26.988575202606796 26.25331596443024 27.892414970826813 18.86569386213616 21 26.100425830040173 25.87747625459309 28.813404706388912 19.208693208977827 22 26.270830824694492 23.4648042531919 28.824351494054067 21.440013428059537 23 24.093149865172066 25.614388457707086 29.658496714139236 20.63396496298161 24 23.048826321915833 25.413697350512493 30.733471262857915 20.80400506471376 25 23.509321189696884 26.65907689388549 28.754656945919223 21.076944970498406 26 22.94300737448596 27.682601540577917 27.693183435320908 21.68120764961522 27 22.227087461184517 27.026524066512682 29.388475951731962 21.35791252057084 28 21.894670009085836 26.981277344163356 29.71578490292024 21.40826774383057 29 22.73246415839272 26.196757561493577 29.168080626740085 21.902697653373618 30 23.630830532780156 25.844635891597612 29.420586528883096 21.103947046739137 31 24.354413197447208 26.199311811948782 27.948608480841298 21.497666509762713 32 24.264284645670728 26.8517403567923 28.163165519078426 20.720809478458545 33 24.60436484913502 27.17248123538148 27.609987849065693 20.61316606641781 34 22.836093748289564 26.803209598143425 29.165526376284877 21.195170277282134 35 22.946656303707677 27.557808161195098 28.328097119900164 21.16743841519706 36 24.62625842446534 27.7479173736467 26.8269276380846 20.79889656380335 37 23.48158932761181 28.755021838841394 27.083812255293683 20.679576578253112 38 23.530120086260688 27.79571834645123 27.51657526098966 21.157586306298416 39 23.09772197348688 27.49212743520414 27.18890141687922 22.221249174429765 40 24.519709691191117 26.856483964780537 27.676763253823168 20.947043090205177 41 22.261752288790852 26.776207521902695 28.204033526361687 22.75800666294476 42 23.089329436276927 26.33833601529631 28.021587065275693 22.55074748315107 43 22.893017044148394 26.287615899114403 28.18615377317526 22.63321328356194 44 22.615333530375512 27.044038926776935 28.405089526478456 21.935538016369097 45 22.032599533666847 27.437758389800514 27.565106019638534 22.964536056894104 46 22.505865653723912 27.392146774529014 27.742079086891952 22.359908484855122 47 22.385086096484986 27.32902029899326 28.386844880369853 21.8990487241519 48 22.60037292056646 27.619110172119992 28.37151937763863 21.408997529674917 49 22.803983171138427 27.555983696584235 28.486460648122808 21.153572484154527 50 21.531236658602534 28.54739776612553 28.239793032734546 21.681572542537392 51 22.210302386764607 27.633705889006873 27.420973315380603 22.735018408847925 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 224.0 1 538.0 2 852.0 3 1803.0 4 2754.0 5 1932.5 6 1111.0 7 999.0 8 887.0 9 880.5 10 874.0 11 898.0 12 922.0 13 921.5 14 921.0 15 873.5 16 826.0 17 880.5 18 935.0 19 976.0 20 1017.0 21 1092.0 22 1167.0 23 1358.5 24 1550.0 25 1909.5 26 2783.0 27 3297.0 28 3850.5 29 4404.0 30 5198.0 31 5992.0 32 6816.5 33 7641.0 34 8353.0 35 9065.0 36 9812.5 37 10560.0 38 11326.0 39 12092.0 40 13275.0 41 14458.0 42 15161.0 43 15864.0 44 16485.5 45 17107.0 46 17401.5 47 17696.0 48 17927.5 49 18159.0 50 18201.5 51 18244.0 52 17767.0 53 17290.0 54 16441.0 55 15592.0 56 15108.0 57 14624.0 58 14019.0 59 13414.0 60 12439.0 61 11464.0 62 10262.5 63 9061.0 64 8087.5 65 7114.0 66 6177.0 67 5240.0 68 4414.5 69 3589.0 70 2871.0 71 2153.0 72 1808.5 73 1464.0 74 1197.0 75 752.0 76 574.0 77 433.0 78 292.0 79 227.5 80 163.0 81 129.5 82 96.0 83 75.0 84 54.0 85 40.5 86 27.0 87 20.0 88 13.0 89 9.0 90 5.0 91 2.5 92 0.0 93 1.5 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 274053.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.88799364932112 #Duplication Level Percentage of deduplicated Percentage of total 1 63.991609166538055 29.364465550439366 2 12.02457464484171 11.035672098765682 3 7.228877796382537 9.951560952363607 4 4.903628471054388 9.00070688553496 5 3.4941795567813725 8.017044465558563 6 2.453144245727675 6.754192054129211 7 1.8511572955381896 5.9462125955085625 8 1.2982280190128952 4.7658463273467575 9 0.8507281673268419 3.5134387865633436 >10 1.8918228287767802 10.81444408713111 >50 0.008836525881018693 0.25103544730043503 >100 0.002409961603914189 0.2875295872163573 >500 8.03320534638063E-4 0.2978511621420727 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 808 0.2948334811149668 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 488 0.17806774601993045 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007662751365611761 0.0 2 0.0 0.0 0.0 0.037948863905886816 0.0 3 0.0 0.0 0.0 0.04889565157104648 0.0 4 0.0 0.0 0.0 0.06312647553575404 0.0 5 0.0 0.0 0.0 0.10654873327422068 0.0 6 0.0 0.0 0.0 0.1769730672534145 0.0 7 0.0 0.0 0.0 0.22221978960274108 0.0 8 0.0 0.0 0.0 0.35467592035117296 0.0 9 0.0 0.0 0.0 0.4199917534199589 0.0 10 0.0 0.0 0.0 0.546244704491467 0.0 11 0.0 0.0 0.0 0.707892269013658 0.0 12 0.0 0.0 0.0 0.8523898661937654 0.0 13 0.0 0.0 0.0 0.9100429478969396 0.0 14 0.0 0.0 0.0 0.9472620259584825 0.0 15 0.0 0.0 0.0 0.995062998763013 0.0 16 0.0 0.0 0.0 1.0757043345630224 0.0 17 0.0 0.0 0.0 1.1764147810824914 0.0 18 0.0 0.0 0.0 1.2727465125358963 0.0 19 0.0 0.0 0.0 1.3420761677485742 0.0 20 0.0 0.0 0.0 1.4165143238716598 0.0 21 0.0 0.0 0.0 1.5026290535042492 0.0 22 0.0 0.0 0.0 1.5949469628137622 0.0 23 0.0 0.0 0.0 1.6923733730336832 0.0 24 0.0 0.0 0.0 1.7828668177323364 0.0 25 0.0 0.0 0.0 1.8711709048979577 0.0 26 0.0 0.0 0.0 1.9496228831649351 0.0 27 0.0 0.0 0.0 2.0470492933848563 0.0 28 0.0 0.0 0.0 2.1371778451613372 0.0 29 0.0 0.0 0.0 2.239712756291666 0.0 30 0.0 0.0 0.0 2.3681550648962064 0.0 31 0.0 0.0 0.0 2.465581475116127 0.0 32 0.0 0.0 0.0 2.5717653154681757 0.0 33 0.0 0.0 0.0 2.6794087275089127 0.0 34 0.0 0.0 0.0 2.7870521395496493 0.0 35 0.0 0.0 0.0 2.9293603791967247 0.0 36 0.0 0.0 0.0 3.048315471824793 0.0 37 0.0 0.0 0.0 3.1833258530284287 0.0 38 0.0 0.0 0.0 3.3318372723524283 0.0 39 3.6489292217198863E-4 0.0 0.0 3.6095207861253114 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTAAG 20 7.023874E-4 45.000004 2 CCCCATA 20 7.023874E-4 45.000004 32 AGTAGCG 20 7.023874E-4 45.000004 1 GGCGTAG 25 3.8830072E-5 45.0 1 ATAGCGG 25 3.8830072E-5 45.0 2 CGAATAT 25 3.8830072E-5 45.0 14 GCTACGA 25 3.8830072E-5 45.0 10 AGCTACG 25 3.8830072E-5 45.0 9 AGCGACT 55 6.002665E-11 40.909092 19 TTACGGG 50 1.0750227E-9 40.5 3 GGCCGAT 40 3.4453842E-7 39.375004 8 CGACCAA 80 0.0 39.375004 29 GTCAAGC 80 0.0 39.375004 16 ACGACCA 80 0.0 39.375004 28 TAGCGGG 115 0.0 39.130432 3 CACGGGC 35 6.23089E-6 38.571426 4 CACGAGG 35 6.23089E-6 38.571426 3 CGTTATT 70 0.0 38.571426 1 GCAATCG 35 6.23089E-6 38.571426 21 CAATCGG 35 6.23089E-6 38.571426 22 >>END_MODULE