SRR2934671.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934671.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	392932
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	911	0.2318467317500229	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	534	0.13590137733755459	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAATCG	55	1.8189894E-12	45.000004	20
TAATCGT	55	1.8189894E-12	45.000004	21
CGTATAG	25	3.8861028E-5	45.0	2
CTACGAA	45	3.8380676E-10	45.0	11
CGTAATG	20	7.027614E-4	45.0	34
CGTAAAG	20	7.027614E-4	45.0	2
CCGCGTC	20	7.027614E-4	45.0	12
ACCCGCG	20	7.027614E-4	45.0	10
GCTACGA	45	3.8380676E-10	45.0	10
CGTACAG	30	2.1618416E-6	44.999996	2
TCGCGAG	30	2.1618416E-6	44.999996	2
AGGCGAT	310	0.0	42.82258	7
CGTTTTA	210	0.0	41.785713	1
CATACGA	185	0.0	41.351353	18
TCAAGCG	355	0.0	40.56338	17
TACGAAT	50	1.0768417E-9	40.5	12
CGAATAT	50	1.0768417E-9	40.5	14
GACACGA	340	0.0	40.367645	25
CGACCAA	335	0.0	40.298508	29
AGCGATT	45	1.9226718E-8	40.0	22