SRR2934670.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934670.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	293538
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1571	0.5351947618366276	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	910	0.310010969618925	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	375	0.12775177319461192	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCGGT	25	3.8836843E-5	45.000004	24
GGGCGTA	25	3.8836843E-5	45.000004	8
CGATATA	30	2.159959E-6	45.000004	10
TGTCGCA	25	3.8836843E-5	45.000004	39
GTACGGG	45	3.8198777E-10	45.000004	3
CCGTGAC	20	7.0246944E-4	45.0	42
TACGCGG	20	7.0246944E-4	45.0	2
TGCGCAA	20	7.0246944E-4	45.0	1
GGTATAC	20	7.0246944E-4	45.0	8
CGAATAT	55	1.8189894E-12	45.0	14
TTAACGG	20	7.0246944E-4	45.0	2
ACTCGCT	20	7.0246944E-4	45.0	18
TTCGGTA	20	7.0246944E-4	45.0	25
TTACGCG	20	7.0246944E-4	45.0	1
CGTTTTA	315	0.0	43.57143	1
AGGCGAT	165	0.0	42.272728	7
AAGGCGA	80	0.0	42.1875	6
AGGACCG	55	6.002665E-11	40.909092	7
CGAGACA	55	6.002665E-11	40.909092	22
CGTTTTT	585	0.0	40.384617	1