SRR2934669.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934669.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	343301
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3982	1.1599150599619574	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2188	0.6373415748861786	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	823	0.2397313145024337	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	442	0.1287499890766412	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGAG	20	7.026367E-4	45.0	32
AAGCGAT	20	7.026367E-4	45.0	6
CGACAAT	25	3.8850718E-5	45.0	20
AGCGAAG	40	6.7902874E-9	45.0	2
TAGGCGT	20	7.026367E-4	45.0	6
CGGAGCA	20	7.026367E-4	45.0	26
AATACGG	20	7.026367E-4	45.0	2
TTCTCGG	20	7.026367E-4	45.0	42
TTTACGG	30	2.1610394E-6	44.999996	2
TAGGCGA	30	2.1610394E-6	44.999996	6
TCGACAA	30	2.1610394E-6	44.999996	19
CGTTTTA	810	0.0	44.722225	1
CGTTATT	415	0.0	43.915665	1
CGTTTTT	1625	0.0	43.33846	1
AGGCGAT	135	0.0	43.333332	7
GCGATGC	60	3.6379788E-12	41.249996	9
CGGTTTA	45	1.9215804E-8	40.0	1
CGAGGAT	45	1.9215804E-8	40.0	5
GGCGATA	85	0.0	39.705883	8
ACGGGTG	40	3.4487857E-7	39.375	5