##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934669.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 343301 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.896676677318155 31.0 31.0 34.0 30.0 34.0 2 32.08958319375708 33.0 31.0 34.0 30.0 34.0 3 31.580819747102396 33.0 31.0 34.0 28.0 34.0 4 35.540799473348464 37.0 35.0 37.0 33.0 37.0 5 32.01187587568926 37.0 35.0 37.0 0.0 37.0 6 33.93217031118465 37.0 35.0 37.0 19.0 37.0 7 20.943405349824207 32.0 0.0 37.0 0.0 37.0 8 28.247036856869045 35.0 17.0 37.0 17.0 37.0 9 35.03090291027407 37.0 32.0 39.0 32.0 39.0 10 36.32341006871521 37.0 35.0 39.0 32.0 39.0 11 36.71617035779098 39.0 37.0 39.0 33.0 39.0 12 37.14968497033216 39.0 37.0 39.0 34.0 39.0 13 37.02340220389687 39.0 37.0 39.0 33.0 39.0 14 38.47476704116796 40.0 38.0 41.0 34.0 41.0 15 38.63404126408021 40.0 38.0 41.0 35.0 41.0 16 38.6702805992409 40.0 38.0 41.0 35.0 41.0 17 38.62675319908768 40.0 38.0 41.0 35.0 41.0 18 38.48564088074314 40.0 38.0 41.0 34.0 41.0 19 38.36853373570133 40.0 37.0 41.0 34.0 41.0 20 38.24860399474514 40.0 37.0 41.0 34.0 41.0 21 38.15507965313238 40.0 37.0 41.0 34.0 41.0 22 38.06778308248447 40.0 36.0 41.0 34.0 41.0 23 37.96914369605681 40.0 36.0 41.0 34.0 41.0 24 37.80951701276722 40.0 35.0 41.0 33.0 41.0 25 37.665826781745466 40.0 35.0 41.0 33.0 41.0 26 37.57175481574478 39.0 35.0 41.0 33.0 41.0 27 37.530697551128604 39.0 35.0 41.0 33.0 41.0 28 37.45650027235575 39.0 35.0 41.0 33.0 41.0 29 37.4464711725279 40.0 35.0 41.0 33.0 41.0 30 37.28710373695387 39.0 35.0 41.0 33.0 41.0 31 37.11880536322353 39.0 35.0 41.0 32.0 41.0 32 36.92223733691425 39.0 35.0 41.0 31.0 41.0 33 36.636263803484404 39.0 35.0 41.0 31.0 41.0 34 36.309605856085476 39.0 35.0 41.0 30.0 41.0 35 35.97878829365484 39.0 35.0 41.0 27.0 41.0 36 35.74459730673665 39.0 35.0 41.0 25.0 41.0 37 35.62450735651804 39.0 35.0 41.0 25.0 41.0 38 35.46986463773773 39.0 35.0 41.0 24.0 41.0 39 35.412387380170756 39.0 35.0 41.0 23.0 41.0 40 35.31615695847085 39.0 35.0 41.0 23.0 41.0 41 35.21452894107503 39.0 35.0 41.0 23.0 41.0 42 35.098418006355935 39.0 35.0 40.0 22.0 41.0 43 35.0089775444872 39.0 35.0 40.0 22.0 41.0 44 34.87961876021334 39.0 34.0 40.0 21.0 41.0 45 34.79680513601767 39.0 34.0 40.0 20.0 41.0 46 34.68138455757484 38.0 34.0 40.0 20.0 41.0 47 34.65612683912951 38.0 34.0 40.0 20.0 41.0 48 34.54494743679744 38.0 34.0 40.0 20.0 41.0 49 34.4498559573086 38.0 34.0 40.0 20.0 41.0 50 34.31962913012196 38.0 34.0 40.0 20.0 41.0 51 32.745846938983576 36.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 12.0 10 14.0 11 7.0 12 3.0 13 4.0 14 10.0 15 10.0 16 20.0 17 64.0 18 107.0 19 218.0 20 457.0 21 808.0 22 1313.0 23 2467.0 24 3946.0 25 5554.0 26 6691.0 27 6576.0 28 6383.0 29 6116.0 30 6689.0 31 8018.0 32 10460.0 33 14939.0 34 20575.0 35 27221.0 36 35456.0 37 63252.0 38 69506.0 39 46391.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.436544024048864 18.701372847734206 23.603193698824064 23.258889429392866 2 35.44527979819459 23.946332809983076 24.05352737102426 16.554860020798078 3 29.304604414202114 22.8630269064174 32.312460493852335 15.519908185528152 4 24.844087258703006 24.67746962578029 32.62151872554988 17.85692438996682 5 20.96644052886534 35.05320403960373 28.347135604032616 15.633219827498317 6 24.540563528798344 32.440045324656786 30.651236087282008 12.368155059262863 7 47.15162495885535 41.907247575742566 9.110663819796622 1.83046364560546 8 82.80109874425067 3.053005962697458 12.494866021363176 1.6510292716886932 9 77.31262070311476 6.175047553021984 13.84674090666791 2.6655908371953476 10 33.491891954873424 34.388772534889206 21.451728949231143 10.667606561006231 11 24.384723609893356 25.064884751282403 35.24108581099385 15.30930582783039 12 23.35792788252874 23.411525163049333 35.88367059810487 17.34687635631705 13 20.175006772482458 26.148773233984173 36.643062502002614 17.033157491530755 14 18.20851089859919 27.397240322632328 35.75637705686846 18.637871721900023 15 17.732252454842833 26.575512451172585 38.20320942846074 17.48902566552384 16 20.95944957923222 25.841171450126854 36.88483284348138 16.31454612715955 17 20.62825334036312 25.30548993448898 35.39255638637813 18.673700338769766 18 22.008965892904477 23.845546619438917 36.80123273745197 17.34425475020463 19 20.90643487784772 26.17440671597228 34.48955872543337 18.429599680746634 20 22.282778086868372 25.709799854937792 35.51693703193408 16.490485026259755 21 21.254234622095478 26.265580350770897 35.85716324741262 16.623021779721004 22 21.42696933594717 23.477939184563983 36.25593866606855 18.83915281342029 23 19.0456771171654 26.72436142044445 35.75229900291581 18.477662459474338 24 18.112676630711825 25.31568506937061 38.76714603219915 17.804492267718416 25 18.329687358906614 27.835339832974558 36.07563042344765 17.75934238467118 26 18.810897725319762 28.190421816423488 34.83473686356871 18.163943594688043 27 18.167439069504603 28.040407688879437 35.64889120625923 18.143262035356727 28 17.219874104648692 28.23236751422221 36.50673898415676 18.041019396972334 29 18.070148353777007 25.83126760481327 36.96144199987766 19.137142041532066 30 18.239678882380186 26.777667411396994 36.937847544865875 18.044806161356945 31 20.417068403529264 26.85922849045007 34.859787766420716 17.86391533959994 32 19.34687053052569 26.679794116533305 35.58422492215286 18.38911043078814 33 19.336092816507964 27.46831497723572 34.128359661055455 19.06723254520086 34 18.52368621122572 26.95622791660962 35.06194272664513 19.45814314551953 35 18.2428830676287 27.64104969108741 34.96028266739683 19.155784573887054 36 20.129856889435217 28.432483447470297 33.01767253809339 18.419987125001093 37 19.304050964022824 28.51579226393165 33.58918267060102 18.590974101444505 38 18.773903950177832 29.223625914285133 33.159239268164086 18.843230867372945 39 19.30346838488673 28.074197278772857 32.77968896099924 19.84264537534117 40 21.548145796254598 27.20149373290494 32.49772065913004 18.752639811710424 41 18.611946950343867 27.704259527353546 33.0520447071229 20.63174881517968 42 19.63349946548364 27.947777606240585 32.24196841838503 20.17675450989074 43 19.77827038080285 28.010696152938674 32.14467770265744 20.066355763601038 44 19.66350229099245 28.45258242766552 31.81581178033271 20.06810350100932 45 19.46513409515265 29.459861753971005 31.04010766062435 20.034896490251995 46 19.906146501175353 28.818442125132172 31.13361161196734 20.14179976172513 47 19.14821104511784 28.229745908109795 32.80357470557907 19.818468341193295 48 19.252201420910513 28.414714783819445 32.50209000265073 19.830993792619307 49 19.740111447388735 27.919522518140056 32.249250657586195 20.091115376885007 50 18.992662415780902 28.42490991870108 32.855424248691385 19.727003416826633 51 19.127238196218478 27.753196174785394 31.884556118391732 21.235009510604396 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 242.0 1 500.5 2 759.0 3 5944.5 4 11130.0 5 7740.0 6 4350.0 7 3817.5 8 3285.0 9 3135.5 10 2986.0 11 2871.5 12 2757.0 13 2683.0 14 2609.0 15 2528.5 16 2448.0 17 2411.5 18 2375.0 19 2373.5 20 2372.0 21 2556.5 22 2741.0 23 3054.5 24 3368.0 25 3845.0 26 5178.5 27 6035.0 28 6919.5 29 7804.0 30 8927.5 31 10051.0 32 11295.5 33 12540.0 34 13637.5 35 14735.0 36 16062.5 37 17390.0 38 18360.0 39 19330.0 40 20680.5 41 22031.0 42 22601.0 43 23171.0 44 23090.0 45 23009.0 46 22705.5 47 22402.0 48 22468.5 49 22535.0 50 22084.5 51 21634.0 52 20573.5 53 19513.0 54 17568.0 55 15623.0 56 13808.5 57 11994.0 58 10415.0 59 8836.0 60 7720.5 61 6605.0 62 5610.5 63 4616.0 64 3766.0 65 2916.0 66 2305.5 67 1695.0 68 1408.5 69 1122.0 70 907.5 71 693.0 72 584.0 73 475.0 74 416.5 75 299.0 76 240.0 77 173.5 78 107.0 79 77.0 80 47.0 81 36.0 82 25.0 83 18.5 84 12.0 85 10.5 86 9.0 87 5.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 343301.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.41936402911162 #Duplication Level Percentage of deduplicated Percentage of total 1 69.926922835849 33.15890209388722 2 10.08706607022258 9.5664451593917 3 5.523806752915792 7.85806209728937 4 3.6904282000886988 6.999910329732206 5 2.775110362694434 6.579698425478367 6 2.0798704696359582 5.917568095984011 7 1.5598290502524006 5.177627108997142 8 1.189424179505905 4.512139052241433 9 0.9019356326736702 3.849229268692188 >10 2.250565607668545 13.699576397829594 >50 0.010653927265889306 0.33402797636801906 >100 0.0025068064155033664 0.26864883508602244 >500 6.267016038758416E-4 0.24457742397765098 >1k 0.0012534032077516832 1.8335877350450867 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3982 1.1599150599619574 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2188 0.6373415748861786 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 823 0.2397313145024337 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 442 0.1287499890766412 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.9128956804669954E-4 0.0 0.0 0.009321266177494385 0.0 2 2.9128956804669954E-4 0.0 0.0 0.041945697798724736 0.0 3 2.9128956804669954E-4 0.0 0.0 0.0667053110826942 0.0 4 2.9128956804669954E-4 0.0 0.0 0.09466910961517735 0.0 5 2.9128956804669954E-4 0.0 0.0 0.1785605052126268 0.0 6 2.9128956804669954E-4 0.0 0.0 0.30468888817684775 0.0 7 2.9128956804669954E-4 0.0 0.0 0.40430992044881897 0.0 8 2.9128956804669954E-4 0.0 0.0 0.6140384094424426 0.0 9 2.9128956804669954E-4 0.0 0.0 0.7186113643712078 0.0 10 2.9128956804669954E-4 0.0 0.0 0.9251356681163178 0.0 11 2.9128956804669954E-4 0.0 0.0 1.1788488818849931 0.0 12 2.9128956804669954E-4 0.0 0.0 1.3731390237721417 0.0 13 2.9128956804669954E-4 0.0 0.0 1.467808133387319 0.0 14 2.9128956804669954E-4 0.0 0.0 1.517327359955258 0.0 15 2.9128956804669954E-4 0.0 0.0 1.5779155901089714 0.0 16 2.9128956804669954E-4 0.0 0.0 1.7066655791856127 0.0 17 2.9128956804669954E-4 0.0 0.0 1.8552232588894293 0.0 18 2.9128956804669954E-4 0.0 0.0 2.014558652610974 0.0 19 2.9128956804669954E-4 0.0 0.0 2.1205880553799727 0.0 20 2.9128956804669954E-4 0.0 0.0 2.217296191971477 0.0 21 2.9128956804669954E-4 0.0 0.0 2.348959076728585 0.0 22 2.9128956804669954E-4 0.0 0.0 2.5144115513791103 0.0 23 2.9128956804669954E-4 0.0 0.0 2.6734556555326083 0.0 24 2.9128956804669954E-4 0.0 0.0 2.8121094899228374 0.0 25 2.9128956804669954E-4 0.0 0.0 2.948433007768693 0.0 26 2.9128956804669954E-4 0.0 0.0 3.0707746263483067 0.0 27 2.9128956804669954E-4 0.0 0.0 3.202146221537368 0.0 28 0.0058257913609339905 0.0 0.0 3.3384697393832234 0.0 29 0.0058257913609339905 0.0 0.0 3.4934357895840678 0.0 30 0.0058257913609339905 0.0 0.0 3.699668803761131 0.0 31 0.0058257913609339905 0.0 0.0 3.8648299888436095 0.0 32 0.0058257913609339905 0.0 0.0 4.046012100168657 0.0 33 0.0058257913609339905 0.0 0.0 4.219329393156443 0.0 34 0.0058257913609339905 0.0 0.0 4.383907999102828 0.0 35 0.0058257913609339905 0.0 0.0 4.574702666173416 0.0 36 0.0058257913609339905 0.0 0.0 4.757049935770651 0.0 37 0.0058257913609339905 0.0 0.0 4.95658328988264 0.0 38 0.0058257913609339905 0.0 0.0 5.156407933562675 0.0 39 0.0058257913609339905 0.0 0.0 5.386526692319568 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGGAG 20 7.026367E-4 45.0 32 AAGCGAT 20 7.026367E-4 45.0 6 CGACAAT 25 3.8850718E-5 45.0 20 AGCGAAG 40 6.7902874E-9 45.0 2 TAGGCGT 20 7.026367E-4 45.0 6 CGGAGCA 20 7.026367E-4 45.0 26 AATACGG 20 7.026367E-4 45.0 2 TTCTCGG 20 7.026367E-4 45.0 42 TTTACGG 30 2.1610394E-6 44.999996 2 TAGGCGA 30 2.1610394E-6 44.999996 6 TCGACAA 30 2.1610394E-6 44.999996 19 CGTTTTA 810 0.0 44.722225 1 CGTTATT 415 0.0 43.915665 1 CGTTTTT 1625 0.0 43.33846 1 AGGCGAT 135 0.0 43.333332 7 GCGATGC 60 3.6379788E-12 41.249996 9 CGGTTTA 45 1.9215804E-8 40.0 1 CGAGGAT 45 1.9215804E-8 40.0 5 GGCGATA 85 0.0 39.705883 8 ACGGGTG 40 3.4487857E-7 39.375 5 >>END_MODULE