SRR2934667.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934667.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	316016
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1016	0.321502708723609	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	540	0.1708774239279024	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTTA	20	7.025516E-4	45.0	38
CGAACCA	20	7.025516E-4	45.0	15
TAACGCC	20	7.025516E-4	45.0	12
CTAACGG	20	7.025516E-4	45.0	2
ACTACTC	20	7.025516E-4	45.0	33
ACTAACG	20	7.025516E-4	45.0	1
CGTAAAG	20	7.025516E-4	45.0	2
CGATGCG	20	7.025516E-4	45.0	10
ATAACGC	20	7.025516E-4	45.0	11
TCGAACC	20	7.025516E-4	45.0	14
CGCCAGT	20	7.025516E-4	45.0	26
CGGAAAG	25	3.8843667E-5	44.999996	2
AGGCGAT	230	0.0	44.999996	7
CGTTAAG	25	3.8843667E-5	44.999996	2
GCGATCA	25	3.8843667E-5	44.999996	9
TAGGCGA	60	0.0	44.999996	6
GCTACGA	30	2.1604883E-6	44.999996	10
AATACGG	25	3.8843667E-5	44.999996	2
CGTTTTA	195	0.0	42.692307	1
GAGGCGA	65	0.0	41.53846	6