##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934667.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 316016 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.91646625487317 31.0 31.0 34.0 30.0 34.0 2 32.10619082578097 33.0 31.0 34.0 30.0 34.0 3 31.982304693433242 33.0 31.0 34.0 30.0 34.0 4 35.7593792719356 37.0 35.0 37.0 35.0 37.0 5 32.0897707711002 37.0 35.0 37.0 10.0 37.0 6 33.96010645030631 37.0 35.0 37.0 19.0 37.0 7 20.850494911650042 32.0 0.0 37.0 0.0 37.0 8 28.177478355526304 35.0 17.0 37.0 17.0 37.0 9 34.91735545035694 37.0 32.0 39.0 32.0 39.0 10 36.253762467723156 37.0 35.0 39.0 32.0 39.0 11 36.590587185458965 38.0 35.0 39.0 32.0 39.0 12 36.89720773631715 39.0 35.0 39.0 33.0 39.0 13 36.61312401903701 39.0 35.0 39.0 33.0 39.0 14 37.937632904663054 40.0 37.0 41.0 33.0 41.0 15 38.1604855450357 40.0 37.0 41.0 33.0 41.0 16 38.24718368690193 40.0 37.0 41.0 34.0 41.0 17 38.24442749734191 40.0 37.0 41.0 34.0 41.0 18 38.14227127740367 40.0 37.0 41.0 34.0 41.0 19 38.0903087185459 40.0 37.0 41.0 34.0 41.0 20 38.069778112500636 40.0 37.0 41.0 34.0 41.0 21 37.967719988861326 40.0 36.0 41.0 33.0 41.0 22 37.95677117614298 40.0 36.0 41.0 33.0 41.0 23 37.92282985671611 40.0 36.0 41.0 33.0 41.0 24 37.784165991595366 40.0 36.0 41.0 33.0 41.0 25 37.64953673231735 39.0 36.0 41.0 33.0 41.0 26 37.51766049820262 39.0 35.0 41.0 33.0 41.0 27 37.48914928358058 39.0 35.0 41.0 33.0 41.0 28 37.401520809072956 39.0 35.0 41.0 33.0 41.0 29 37.409216621943195 39.0 35.0 41.0 33.0 41.0 30 37.2779859247633 39.0 35.0 41.0 32.0 41.0 31 37.13284453951699 39.0 35.0 41.0 32.0 41.0 32 37.03642853526404 39.0 35.0 41.0 32.0 41.0 33 36.904625082274315 39.0 35.0 41.0 31.0 41.0 34 36.739057516075135 39.0 35.0 41.0 31.0 41.0 35 36.612608222368486 39.0 35.0 41.0 31.0 41.0 36 36.47408042630753 39.0 35.0 41.0 30.0 41.0 37 36.37230709837477 39.0 35.0 40.0 30.0 41.0 38 36.24288010733634 39.0 35.0 40.0 30.0 41.0 39 36.21535934889373 39.0 35.0 40.0 30.0 41.0 40 36.12303490962483 39.0 35.0 40.0 30.0 41.0 41 36.017651005012404 39.0 35.0 40.0 29.0 41.0 42 35.91732380638955 39.0 35.0 40.0 29.0 41.0 43 35.82963204394714 38.0 35.0 40.0 28.0 41.0 44 35.699461419674954 38.0 35.0 40.0 28.0 41.0 45 35.56101273353248 38.0 35.0 40.0 27.0 41.0 46 35.450958179332694 38.0 34.0 40.0 27.0 41.0 47 35.44008214773935 38.0 34.0 40.0 27.0 41.0 48 35.30569338261354 38.0 34.0 40.0 26.0 41.0 49 35.20439787858842 38.0 34.0 40.0 26.0 41.0 50 35.03132436332338 38.0 34.0 40.0 26.0 41.0 51 33.13070857171789 36.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 11.0 10 6.0 11 16.0 12 5.0 13 2.0 14 7.0 15 8.0 16 18.0 17 57.0 18 110.0 19 181.0 20 329.0 21 591.0 22 881.0 23 1339.0 24 1981.0 25 2833.0 26 3519.0 27 4008.0 28 4442.0 29 5346.0 30 6492.0 31 8609.0 32 11501.0 33 16858.0 34 23922.0 35 29897.0 36 36123.0 37 59338.0 38 60242.0 39 37333.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.60807047744418 18.72088754999747 23.629183332489497 17.041858640068856 2 30.4823173510202 24.519961014632173 27.25653131487013 17.741190319477496 3 31.08513492987697 24.355095944509138 28.13053769429396 16.42923143131993 4 27.31159181813579 25.84299529137765 27.835615918181354 19.0097969723052 5 22.26089818237051 37.2386208293251 24.07947698850691 16.421003999797477 6 26.92047238114526 35.851032859095746 24.547491266265 12.681003493494 7 51.17462406966736 42.26241709280543 4.5681231330059235 1.9948357045212899 8 88.0468077565693 3.0947800111386767 6.484798238063895 2.37361399422814 9 82.44898992456078 6.161080451622702 7.964786593083895 3.425143030732621 10 42.93263632221153 31.457267986431063 13.932838843602854 11.677256847754544 11 31.347146979899755 25.698382360386816 26.27778340337198 16.676687256341452 12 28.75234165358716 23.4178016302972 29.81462963900562 18.01522707711002 13 23.521593843349702 26.925851855602247 31.323414004354213 18.22914029669384 14 20.209103336539922 29.061503215027084 30.571236899397498 20.158156549035493 15 19.437939851146776 25.449344336995594 36.00956913573996 19.103146676117667 16 22.606133866639663 24.432623664624575 33.99163333502101 18.969609133714748 17 23.300086071591313 23.072249506354108 29.51654346615361 24.111120955900965 18 24.228520074932916 23.71367272543162 31.530365551111334 20.527441648524125 19 25.064237253809935 25.374981013619564 28.66753582097109 20.89324591159941 20 26.5454913675257 25.331628778289705 28.908979292187738 19.213900561996862 21 24.532302161915855 26.743266163738543 29.308326160700727 19.41610551364488 22 23.80797174826591 23.63203128955496 29.099159536226015 23.460837425953116 23 21.882752772011543 26.913510708318565 29.23111488025923 21.972621639410665 24 21.985595666042226 24.77944154726343 32.64423320338211 20.590729583312235 25 21.470115437193055 26.095197711508277 30.9231178168194 21.511569034479265 26 20.76667004202319 27.961242468735758 29.129537744924306 22.142549744316746 27 21.31031340185307 27.740367576325248 29.68520581236393 21.26411320945775 28 19.552807452787203 27.1587514556225 31.999012708217307 21.289428383372993 29 20.28789681535112 25.047149511417143 31.896169814186624 22.76878385904511 30 21.933383119842034 25.849956964204345 30.578831451572075 21.63782846438155 31 24.482937572781125 25.930649081059187 28.827337856311075 20.759075489848616 32 24.7183686901929 26.237279125107587 28.454888360083036 20.589463824616473 33 23.985494405346564 25.543643359829883 28.01788517037112 22.452977064452433 34 21.14639765075186 25.611045010379218 30.583578046681183 22.658979292187738 35 21.358728671965977 26.635043795250873 29.13048706394613 22.875740468837023 36 24.367120652118878 26.428408688167686 27.547339375221508 21.657131284491925 37 21.95426813832211 28.14604323831705 29.49818996506506 20.401498658295782 38 20.869512936053873 28.771644473697535 28.228950432889473 22.129892157359123 39 21.786871550807554 26.59770391372589 28.796326768264898 22.81909776720166 40 23.381411067794037 25.555984507113568 28.569123082375576 22.493481342716827 41 19.98727912510759 25.397764670143285 29.089033466659913 25.525922738089214 42 21.707761632322413 25.373082375575922 28.030859197002684 24.88829679509898 43 21.753645385043797 24.93829426358159 28.947268492734544 24.36079185864007 44 21.57517340894132 25.74173459571667 29.443762341147284 23.239329654194723 45 20.8533745126829 27.230583261607006 28.15363779049162 23.76240443521847 46 21.742253556781936 26.989772669738244 28.18876259429902 23.0792111791808 47 20.480608576780924 25.97083691964964 29.961141208040097 23.58741329552934 48 21.874208900815148 24.896207786947496 30.42947192547213 22.800111386765227 49 21.584350159485595 25.006961672826694 30.597184952660623 22.811503215027088 50 20.287263936003242 26.837881626246773 29.64944812920865 23.22540630854134 51 19.928737785428584 26.21512834793175 28.62671510303276 25.229418763606905 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 174.0 1 411.5 2 649.0 3 1841.0 4 3033.0 5 2113.0 6 1193.0 7 1092.0 8 991.0 9 1036.0 10 1081.0 11 1085.5 12 1090.0 13 1092.0 14 1094.0 15 1062.0 16 1030.0 17 1004.0 18 978.0 19 1002.0 20 1026.0 21 1073.5 22 1121.0 23 1300.0 24 1479.0 25 1877.0 26 2950.5 27 3626.0 28 4318.0 29 5010.0 30 5524.0 31 6038.0 32 6883.5 33 7729.0 34 9024.0 35 10319.0 36 11195.5 37 12072.0 38 13115.0 39 14158.0 40 15817.5 41 17477.0 42 19114.0 43 20751.0 44 22295.0 45 23839.0 46 24806.0 47 25773.0 48 25408.0 49 25043.0 50 24188.5 51 23334.0 52 21753.0 53 20172.0 54 18600.5 55 17029.0 56 15863.0 57 14697.0 58 13875.5 59 13054.0 60 12124.0 61 11194.0 62 9974.5 63 8755.0 64 7488.5 65 6222.0 66 5230.5 67 4239.0 68 3644.5 69 3050.0 70 2565.0 71 2080.0 72 1643.5 73 1207.0 74 1031.0 75 676.5 76 498.0 77 405.0 78 312.0 79 226.5 80 141.0 81 104.5 82 68.0 83 48.0 84 28.0 85 22.5 86 17.0 87 12.5 88 8.0 89 6.5 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 316016.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.56818340673662 #Duplication Level Percentage of deduplicated Percentage of total 1 70.05603459971205 29.121020949895165 2 8.664540764375722 7.203384392574318 3 4.51232837090958 5.627078799401715 4 3.2167674618667417 5.348607193267974 5 2.41490948803775 5.019170025471081 6 2.002399691593241 4.994167058024441 7 1.6516368990165828 4.805888187775853 8 1.3786020610866085 4.584478665612261 9 1.246012128017982 4.661501459802269 >10 4.836091720785295 27.46164818106057 >50 0.014550351013714512 0.43420546508112423 >100 0.004594847688541425 0.24352432609021993 >500 7.658079480902375E-4 0.17189952429897878 >1k 7.658079480902375E-4 0.32342577164400454 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1016 0.321502708723609 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 540 0.1708774239279024 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04177003696015392 0.0 2 0.0 0.0 0.0 0.19144600273403878 0.0 3 0.0 0.0 0.0 0.24777226469545846 0.0 4 0.0 0.0 0.0 0.32435066578907396 0.0 5 0.0 0.0 0.0 0.5756037668978786 0.0 6 0.0 0.0 0.0 0.7578730190876412 0.0 7 0.0 0.0 0.0 0.9689382816059946 0.0 8 0.0 0.0 0.0 1.4730266821933067 0.0 9 0.0 0.0 0.0 1.6290314414460028 0.0 10 0.0 0.0 0.0 2.10780466811807 0.0 11 0.0 0.0 0.0 2.700812617082679 0.0 12 0.0 0.0 0.0 3.182117361146271 0.0 13 0.0 0.0 0.0 3.371981165510607 0.0 14 0.0 0.0 0.0 3.4450787301908763 0.0 15 0.0 0.0 0.0 3.6118424383575514 0.0 16 0.0 0.0 0.0 3.9311300693635767 0.0 17 0.0 0.0 0.0 4.3368057313553745 0.0 18 0.0 0.0 0.0 4.759569135739962 0.0 19 0.0 0.0 0.0 5.010505797174827 0.0 20 0.0 0.0 0.0 5.2753658042630756 0.0 21 0.0 0.0 0.0 5.626297402663156 0.0 22 0.0 0.0 0.0 6.032605944002835 0.0 23 0.0 0.0 0.0 6.460748822844413 0.0 24 0.0 0.0 0.0 6.764847349501291 0.0 25 0.0 0.0 0.0 7.051541694091439 0.0 26 0.0 0.0 0.0 7.327160650093666 0.0 27 0.0 0.0 0.0 7.615753632727457 0.0 28 0.0 0.0 0.0 7.933142625689839 0.0 29 0.0 0.0 0.0 8.246101463217052 0.0 30 0.0 0.0 0.0 8.616652321401448 0.0 31 0.0 0.0 0.0 8.961888005670598 0.0 32 0.0 0.0 0.0 9.269467368740823 0.0 33 0.0 0.0 0.0 9.58938787909473 0.0 34 0.0 0.0 0.0 9.92323173510202 0.0 35 0.0 0.0 0.0 10.285555161763961 0.0 36 0.0 0.0 0.0 10.612120905270618 0.0 37 0.0 0.0 0.0 10.95672371019189 0.0 38 0.0 0.0 0.0 11.309237506961672 0.0 39 0.0 0.0 0.0 11.701622702647967 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTTA 20 7.025516E-4 45.0 38 CGAACCA 20 7.025516E-4 45.0 15 TAACGCC 20 7.025516E-4 45.0 12 CTAACGG 20 7.025516E-4 45.0 2 ACTACTC 20 7.025516E-4 45.0 33 ACTAACG 20 7.025516E-4 45.0 1 CGTAAAG 20 7.025516E-4 45.0 2 CGATGCG 20 7.025516E-4 45.0 10 ATAACGC 20 7.025516E-4 45.0 11 TCGAACC 20 7.025516E-4 45.0 14 CGCCAGT 20 7.025516E-4 45.0 26 CGGAAAG 25 3.8843667E-5 44.999996 2 AGGCGAT 230 0.0 44.999996 7 CGTTAAG 25 3.8843667E-5 44.999996 2 GCGATCA 25 3.8843667E-5 44.999996 9 TAGGCGA 60 0.0 44.999996 6 GCTACGA 30 2.1604883E-6 44.999996 10 AATACGG 25 3.8843667E-5 44.999996 2 CGTTTTA 195 0.0 42.692307 1 GAGGCGA 65 0.0 41.53846 6 >>END_MODULE