SRR2934661.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934661.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	412341
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1188	0.28811105371525025	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	743	0.18019066743302267	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGAAAA	20	7.02802E-4	45.0	1
GCGTTAA	25	3.8864397E-5	45.0	1
ACTCCGC	20	7.02802E-4	45.0	25
CAATCGC	20	7.02802E-4	45.0	29
CGTTTTA	300	0.0	43.500004	1
CGTTATT	150	0.0	40.500004	1
CGCACTT	95	0.0	40.263157	35
ACGGGTC	45	1.9232175E-8	40.0	5
GGTATGC	125	0.0	39.6	8
CCGCACT	105	0.0	38.57143	34
GCACGGG	95	0.0	37.894737	3
ACATACG	285	0.0	37.894737	17
AGGCGAT	370	0.0	37.7027	7
TAGACGG	30	1.1386522E-4	37.500004	2
ATAGCGG	30	1.1386522E-4	37.500004	2
ATCGCCT	30	1.1386522E-4	37.500004	31
CGAAGGA	60	1.546141E-10	37.500004	4
GTGAAAC	325	0.0	37.384617	37
ACACGAC	315	0.0	37.142857	26
TAAGGCG	85	0.0	37.058823	5