SRR2934660.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934660.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	75094
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1386	1.8456867392867604	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	762	1.0147282073135004	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	313	0.4168109303006898	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	168	0.2237196047620316	No Hit
GGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAA	97	0.12917143846379206	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	91	0.12118145257943379	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	87	0.11585479532319493	No Hit
CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	82	0.10919647375289636	No Hit
GGAGGGGGGGGGCATCATCTGTCCTTATAGCTCATTAGGAAGAGAAACAGT	78	0.10386981649665751	No Hit
GGGGCTAGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAA	76	0.1012064878685381	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATACTG	25	3.855944E-5	45.0	18
CAGTTAT	20	6.9911755E-4	45.0	22
TATGCTT	20	6.9911755E-4	45.0	37
ATTGGGA	20	6.9911755E-4	45.0	4
TTACAGC	20	6.9911755E-4	45.0	16
GGCGATT	20	6.9911755E-4	45.0	8
AGGCGAT	35	1.1917473E-7	45.0	7
TAGTCTA	20	6.9911755E-4	45.0	25
GCTACGA	25	3.855944E-5	45.0	10
AGGTGAG	20	6.9911755E-4	45.0	7
GTTTAGG	25	3.855944E-5	45.0	3
TAACTAG	20	6.9911755E-4	45.0	30
CTAACTA	20	6.9911755E-4	45.0	29
TCATGTT	20	6.9911755E-4	45.0	16
TTCTAGT	20	6.9911755E-4	45.0	22
CTAGCCA	20	6.9911755E-4	45.0	33
ATGCATT	20	6.9911755E-4	45.0	28
CTACGAA	25	3.855944E-5	45.0	11
CGGCTAC	20	6.9911755E-4	45.0	25
GCCAAGC	20	6.9911755E-4	45.0	19