##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934660.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 75094 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.561442991450715 31.0 31.0 34.0 30.0 34.0 2 31.722893972887313 31.0 31.0 34.0 30.0 34.0 3 31.060590726289718 31.0 31.0 34.0 27.0 34.0 4 35.217740431991906 37.0 35.0 37.0 33.0 37.0 5 31.701134577995578 35.0 35.0 37.0 0.0 37.0 6 33.68839055051003 37.0 35.0 37.0 17.0 37.0 7 21.34028018217168 32.0 0.0 37.0 0.0 37.0 8 28.354848589767492 35.0 17.0 37.0 17.0 37.0 9 34.68916291581218 37.0 32.0 39.0 29.0 39.0 10 36.09006045755986 37.0 35.0 39.0 32.0 39.0 11 36.52314432577836 38.0 35.0 39.0 32.0 39.0 12 36.98822808746371 39.0 37.0 39.0 33.0 39.0 13 36.808626521426476 39.0 37.0 39.0 33.0 39.0 14 38.184502090712975 40.0 37.0 41.0 33.0 41.0 15 38.31917330279383 40.0 38.0 41.0 34.0 41.0 16 38.33350201081311 40.0 38.0 41.0 34.0 41.0 17 38.26101952219884 40.0 37.0 41.0 34.0 41.0 18 38.09526726502783 40.0 37.0 41.0 34.0 41.0 19 37.945188696833306 40.0 37.0 41.0 34.0 41.0 20 37.77267158494686 39.0 35.0 41.0 34.0 41.0 21 37.63676192505393 39.0 35.0 41.0 33.0 41.0 22 37.49123764881349 39.0 35.0 40.0 33.0 41.0 23 37.39964577729246 39.0 35.0 40.0 33.0 41.0 24 37.153753961701334 39.0 35.0 40.0 33.0 41.0 25 36.996950488720806 39.0 35.0 40.0 33.0 41.0 26 36.816137108157776 38.0 35.0 40.0 32.0 41.0 27 36.75726422883319 38.0 35.0 40.0 32.0 41.0 28 36.6329134151863 38.0 35.0 40.0 32.0 41.0 29 36.532878791914136 38.0 35.0 40.0 31.0 41.0 30 36.22399925426799 38.0 35.0 40.0 31.0 41.0 31 35.94586784563347 38.0 35.0 40.0 30.0 41.0 32 35.60140623751565 38.0 35.0 40.0 27.0 41.0 33 35.21018989533118 38.0 34.0 40.0 25.0 41.0 34 34.77541481343383 38.0 34.0 40.0 22.0 41.0 35 34.37445068847045 38.0 33.0 40.0 20.0 41.0 36 34.065437984392894 38.0 33.0 40.0 18.0 41.0 37 33.864463206115005 38.0 33.0 40.0 15.0 41.0 38 33.66255626281727 38.0 33.0 40.0 15.0 41.0 39 33.53186672703545 38.0 33.0 40.0 14.0 41.0 40 33.46158148453938 38.0 33.0 40.0 13.0 41.0 41 33.30325991424082 38.0 33.0 40.0 12.0 41.0 42 33.2052094707966 38.0 33.0 40.0 12.0 41.0 43 33.04656830106267 38.0 32.0 40.0 10.0 41.0 44 32.92073934002717 37.0 32.0 40.0 10.0 41.0 45 32.830199483314246 37.0 31.0 40.0 10.0 41.0 46 32.681159613284684 37.0 31.0 40.0 10.0 41.0 47 32.58075212400458 37.0 31.0 40.0 10.0 41.0 48 32.43043385623352 37.0 31.0 40.0 10.0 41.0 49 32.29437771326604 36.0 31.0 40.0 10.0 41.0 50 32.033478040855464 36.0 30.0 40.0 10.0 41.0 51 30.322768796441792 35.0 26.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 3.0 10 3.0 11 1.0 12 1.0 13 2.0 14 3.0 15 8.0 16 6.0 17 16.0 18 44.0 19 83.0 20 193.0 21 318.0 22 469.0 23 858.0 24 1397.0 25 1845.0 26 2072.0 27 2046.0 28 2040.0 29 1888.0 30 1935.0 31 2372.0 32 2917.0 33 4047.0 34 5459.0 35 6532.0 36 7607.0 37 11878.0 38 11624.0 39 7426.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.834234426185844 14.55109595973047 18.777798492556 24.836871121527686 2 42.41217673848776 19.64737528963699 22.445202013476443 15.495245958398806 3 31.27946307294857 19.988281354036275 35.010786480943885 13.72146909207127 4 27.90902069406344 21.562308573254853 35.472873997922605 15.055796734759102 5 21.99243614669614 33.576584014701574 30.44717287666125 13.983806961941033 6 27.34306336058806 28.37243987535622 34.32231603057501 9.962180733480704 7 41.25629211388393 40.98729592244387 15.066450049271578 2.6899619144006177 8 67.82832183663142 5.720829893200522 22.39726209817029 4.053586171997763 9 60.03808559938211 8.940794204596905 25.444110048738917 5.577010147282073 10 32.740298825472074 24.739659626601327 31.063733454070896 11.4563080938557 11 24.234958851572696 24.268250459424188 36.908408128478975 14.588382560524144 12 23.12168748501878 21.21740751591339 40.01651263749434 15.644392361573495 13 22.04570271925853 23.269502223879403 40.085759181825445 14.59903587503662 14 17.812341864862706 23.314778810557435 41.7862945108797 17.086584813700163 15 18.71920526273737 24.059179162116813 42.42948837457054 14.792127200575278 16 22.069672676911605 22.752816470024236 39.8194263190135 15.358084534050656 17 19.676671904546303 23.633046581617705 38.87660798465923 17.813673529176764 18 19.73926012730711 22.904626201827043 41.004607558526644 16.3515061123392 19 18.327695954403815 25.0579273976616 38.443817082589824 18.170559565344767 20 19.471595600181107 24.547899965376725 39.82741630489786 16.153088129544305 21 20.52094707966016 24.475990092417504 39.9019895064852 15.101073321437134 22 19.243881002476897 21.591605188164166 40.646389858044586 18.51812395131435 23 18.560737209364262 22.37861879777346 41.213678855834026 17.84696513702826 24 19.387700748395346 21.791354835273125 41.753002903028204 17.067941513303325 25 17.274349481982583 23.831464564412602 41.27360374996671 17.620582203638108 26 17.274349481982583 24.502623378698697 41.01659253735318 17.206434601965537 27 17.283671132181 26.18584707167017 39.93128612139452 16.59919567475431 28 16.934775081897353 25.458758356193574 40.26287053559538 17.343596026313687 29 19.239886009534715 23.330758782326154 40.42133858896849 17.00801661917064 30 18.749833541960744 24.452020134764428 39.24814232828189 17.55000399499294 31 19.852451594002186 23.766213013023677 38.45846539004448 17.92287000292966 32 18.238474445361813 24.81156949956055 38.381228859829015 18.56872719524862 33 18.26910272458519 25.112525634538045 37.42908887527632 19.189282765600446 34 17.442139185554105 24.884811036833835 38.6955016379471 18.977548139664954 35 17.902895038218766 25.120515620422402 36.1933043918289 20.78328494952992 36 19.045463019682 26.29903853836525 34.79772019069433 19.857778251258424 37 18.998854768689906 26.92358910165925 35.809785069379714 18.267771060271127 38 17.9281966601859 27.741230990491918 35.285109329640186 19.045463019682 39 18.3050576610648 26.409566676432206 35.960263136868456 19.325112525634538 40 20.714038405198817 25.297626974192344 34.36359762431086 19.624736996297973 41 18.697898633712416 26.401576690547845 33.90151010733214 20.999014568407596 42 18.900311609449492 27.152635363677526 34.17316962740033 19.773883399472663 43 18.84571337257304 26.093962234000053 34.79505686206621 20.265267531360696 44 19.265187631501853 25.19375715769569 34.13987801954883 21.40117719125363 45 18.013423176285723 24.89945934428849 35.59405545050204 21.49306202892375 46 18.700561962340533 25.995419074759635 35.0201081311423 20.28391083175753 47 18.278424374783604 25.707779582922736 34.448824140410686 21.564971901882974 48 18.191866194369723 25.78102112019602 35.5061656057741 20.52094707966016 49 19.44229898527179 24.699709697179532 35.2944309798386 20.563560337710072 50 17.637893839720885 26.29770687405119 35.7804884544704 20.28391083175753 51 18.460862385809783 25.000665832157033 34.65789543771806 21.880576344315124 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 190.0 1 528.5 2 867.0 3 2333.5 4 3800.0 5 2583.0 6 1366.0 7 1207.0 8 1048.0 9 991.5 10 935.0 11 932.0 12 929.0 13 906.5 14 884.0 15 880.0 16 876.0 17 832.5 18 789.0 19 733.5 20 678.0 21 735.5 22 793.0 23 761.5 24 730.0 25 847.5 26 950.0 27 935.0 28 1123.5 29 1312.0 30 1505.5 31 1699.0 32 1871.5 33 2044.0 34 2266.5 35 2489.0 36 2597.0 37 2705.0 38 2876.0 39 3047.0 40 3333.5 41 3620.0 42 3762.0 43 3904.0 44 4175.0 45 4446.0 46 4813.5 47 5181.0 48 5288.5 49 5396.0 50 5308.5 51 5221.0 52 4705.0 53 4189.0 54 3780.5 55 3372.0 56 3095.5 57 2819.0 58 2522.0 59 2225.0 60 2063.5 61 1902.0 62 1673.0 63 1444.0 64 1134.0 65 824.0 66 675.5 67 527.0 68 434.0 69 341.0 70 283.5 71 226.0 72 190.5 73 155.0 74 122.5 75 78.5 76 67.0 77 48.5 78 30.0 79 21.0 80 12.0 81 10.5 82 9.0 83 7.5 84 6.0 85 4.0 86 2.0 87 1.0 88 0.0 89 1.0 90 2.0 91 1.5 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 75094.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.77526833035928 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3348521618543 42.66252962953099 2 7.738596404338567 8.322901962873198 3 3.55356346887227 5.73281487202706 4 2.2856718339854387 4.9165046475084555 5 1.639344262295082 4.407808879537646 6 1.196077460254569 3.859163182145045 7 0.8766282006834729 3.299864170239966 8 0.695854588678124 2.9935813780062324 9 0.5497498885642118 2.660665299491304 >10 2.0801347134862067 16.13178150051935 >50 0.03962161359021346 1.5114389964577728 >100 0.004952701698776683 0.6405305350627214 >500 0.0024763508493883413 1.0147282073135004 >1k 0.0024763508493883413 1.8456867392867604 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1386 1.8456867392867604 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 762 1.0147282073135004 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 313 0.4168109303006898 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 168 0.2237196047620316 No Hit GGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAA 97 0.12917143846379206 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 91 0.12118145257943379 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 87 0.11585479532319493 No Hit CTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 82 0.10919647375289636 No Hit GGAGGGGGGGGGCATCATCTGTCCTTATAGCTCATTAGGAAGAGAAACAGT 78 0.10386981649665751 No Hit GGGGCTAGTGAGATGGCTCAGTGGGTAAGAGCACCCGACTGCTCTTCCGAA 76 0.1012064878685381 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0013316643140597118 0.0 0.0 0.078568194529523 0.0 2 0.0013316643140597118 0.0 0.0 0.3675393506804805 0.0 3 0.0013316643140597118 0.0 0.0 0.48872080325991424 0.0 4 0.0013316643140597118 0.0 0.0 0.6152289130955869 0.0 5 0.0013316643140597118 0.0 0.0 0.9681199563214105 0.0 6 0.0013316643140597118 0.0 0.0 1.2224678403068154 0.0 7 0.0013316643140597118 0.0 0.0 1.4967906890031162 0.0 8 0.0013316643140597118 0.0 0.0 2.157296188776733 0.0 9 0.0013316643140597118 0.0 0.0 2.3397341998029137 0.0 10 0.0013316643140597118 0.0 0.0 2.847098303459664 0.0 11 0.0013316643140597118 0.0 0.0 3.654086877779849 0.0 12 0.0013316643140597118 0.0 0.0 4.217380882627108 0.0 13 0.0013316643140597118 0.0 0.0 4.4477588089594375 0.0 14 0.0013316643140597118 0.0 0.0 4.536980318001438 0.0 15 0.0013316643140597118 0.0 0.0 4.772684901590007 0.0 16 0.0013316643140597118 0.0 0.0 5.282712333874877 0.0 17 0.0013316643140597118 0.0 0.0 5.888619596772045 0.0 18 0.0013316643140597118 0.0 0.0 6.505180174181692 0.0 19 0.0013316643140597118 0.0 0.0 6.906011132713665 0.0 20 0.0026633286281194236 0.0 0.0 7.3028470983034595 0.0 21 0.0026633286281194236 0.0 0.0 7.7556129650837615 0.0 22 0.0026633286281194236 0.0 0.0 8.384158521319947 0.0 23 0.0026633286281194236 0.0 0.0 8.932804218712548 0.0 24 0.0026633286281194236 0.0 0.0 9.358936799211655 0.0 25 0.0026633286281194236 0.0 0.0 9.803712680107598 0.0 26 0.0026633286281194236 0.0 0.0 10.16459370921778 0.0 27 0.0026633286281194236 0.0 0.0 10.546781367352917 0.0 28 0.0026633286281194236 0.0 0.0 10.983567262364502 0.0 29 0.0026633286281194236 0.0 0.0 11.381734892268357 0.0 30 0.0026633286281194236 0.0 0.0 11.897088981809466 0.0 31 0.0026633286281194236 0.0 0.0 12.39113644232562 0.0 32 0.0026633286281194236 0.0 0.0 12.895837217354249 0.0 33 0.0026633286281194236 0.0 0.0 13.367246384531388 0.0 34 0.0026633286281194236 0.0 0.0 13.761419021493062 0.0 35 0.0026633286281194236 0.0 0.0 14.219511545529603 0.0 36 0.0026633286281194236 0.0 0.0 14.65230244759901 0.0 37 0.0026633286281194236 0.0 0.0 15.142354915172984 0.0 38 0.0026633286281194236 0.0 0.0 15.604442432151703 0.0 39 0.0026633286281194236 0.0 0.0 16.055876634617945 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACTG 25 3.855944E-5 45.0 18 CAGTTAT 20 6.9911755E-4 45.0 22 TATGCTT 20 6.9911755E-4 45.0 37 ATTGGGA 20 6.9911755E-4 45.0 4 TTACAGC 20 6.9911755E-4 45.0 16 GGCGATT 20 6.9911755E-4 45.0 8 AGGCGAT 35 1.1917473E-7 45.0 7 TAGTCTA 20 6.9911755E-4 45.0 25 GCTACGA 25 3.855944E-5 45.0 10 AGGTGAG 20 6.9911755E-4 45.0 7 GTTTAGG 25 3.855944E-5 45.0 3 TAACTAG 20 6.9911755E-4 45.0 30 CTAACTA 20 6.9911755E-4 45.0 29 TCATGTT 20 6.9911755E-4 45.0 16 TTCTAGT 20 6.9911755E-4 45.0 22 CTAGCCA 20 6.9911755E-4 45.0 33 ATGCATT 20 6.9911755E-4 45.0 28 CTACGAA 25 3.855944E-5 45.0 11 CGGCTAC 20 6.9911755E-4 45.0 25 GCCAAGC 20 6.9911755E-4 45.0 19 >>END_MODULE