SRR2934657.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934657.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	132562
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	992	0.7483290837494908	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	582	0.43903984550625363	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	215	0.16218825907877069	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCCC	20	7.010697E-4	45.000004	16
GCACGGG	20	7.010697E-4	45.000004	3
CGTCTAC	20	7.010697E-4	45.000004	35
TGACGTT	20	7.010697E-4	45.000004	28
CCGTCTA	20	7.010697E-4	45.000004	34
CATTAAG	20	7.010697E-4	45.000004	22
CGGGGAT	20	7.010697E-4	45.000004	5
TAATTGT	20	7.010697E-4	45.000004	24
GTGTACG	20	7.010697E-4	45.000004	1
TCATCCA	20	7.010697E-4	45.000004	41
GGACCCC	45	3.8016879E-10	45.000004	8
AGGATGC	20	7.010697E-4	45.000004	7
CGTTTTA	140	0.0	45.000004	1
TATCGGG	20	7.010697E-4	45.000004	3
GCACTAG	20	7.010697E-4	45.000004	2
GCGTAAA	20	7.010697E-4	45.000004	1
ACTTATA	25	3.872095E-5	45.0	7
TACGAAT	25	3.872095E-5	45.0	12
ACAACGA	30	2.1509459E-6	44.999996	13
CAACGAG	30	2.1509459E-6	44.999996	14