SRR2934656.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934656.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	364065
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	977	0.26835867221512644	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	603	0.16562976391578427	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGGCG	35	1.208864E-7	45.0	5
CGCGGAT	20	7.0269307E-4	45.0	31
ATTCGTC	20	7.0269307E-4	45.0	20
CGATTTA	20	7.0269307E-4	45.0	10
CGCTGTT	20	7.0269307E-4	45.0	35
TTATCGT	20	7.0269307E-4	45.0	15
CTCGCAC	20	7.0269307E-4	45.0	40
ACGTATG	20	7.0269307E-4	45.0	1
CGCACGA	20	7.0269307E-4	45.0	39
AGGGCGT	20	7.0269307E-4	45.0	6
TATCGTA	20	7.0269307E-4	45.0	16
CGTCAGT	20	7.0269307E-4	45.0	11
CGTTTTA	275	0.0	41.727272	1
TCGTGAC	50	1.0768417E-9	40.5	18
TACGGGA	95	0.0	40.263157	4
GTCATAC	45	1.9221261E-8	40.000004	39
CGTATGG	45	1.9221261E-8	40.000004	2
ACGGGCC	45	1.9221261E-8	40.000004	5
CGGTAGT	90	0.0	40.000004	12
CGAAGGA	85	0.0	39.705883	4