SRR2934651.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934651.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	955722
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTC	21493	2.248875719089861	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17769	1.8592226609830054	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCG	15511	1.6229614888011366	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGC	13804	1.4443530650126293	No Hit
GAACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCT	6356	0.6650469487989186	No Hit
GCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC	4267	0.44646874300267236	No Hit
GAATGACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCT	2941	0.3077254682847104	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTC	2646	0.27685875181276565	No Hit
GAATGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTT	2452	0.25655996199731723	No Hit
GAATCTATCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTC	2147	0.2246469161534421	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTA	1524	0.15946059628218245	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCG	1328	0.138952540592348	No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGC	1249	0.13068653855409837	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1217	0.12733828456392132	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	959	0.10034298676811877	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACGGT	25	3.8903112E-5	45.0	28
CGTTTTT	10055	0.0	44.149677	1
TACGGCT	1675	0.0	42.58209	7
TGATACC	1765	0.0	40.283287	4
CGTTTTA	710	0.0	40.24648	1
ACGGCTG	1890	0.0	40.11905	8
GAATCTG	2585	0.0	40.038685	1
CTATCGG	45	1.927765E-8	40.0	2
CACGACG	45	1.927765E-8	40.0	26
CGGTCTA	45	1.927765E-8	40.0	31
GATACCT	1780	0.0	39.69101	5
ATACGGC	3310	0.0	39.15408	6
GAATGAT	5475	0.0	39.0	1
CATGCGG	75	0.0	39.0	2
AATGATA	5295	0.0	38.796036	2
ATGATAC	5245	0.0	38.77979	3
TATAGCG	35	6.2471863E-6	38.571426	1
AATCTGT	2685	0.0	38.547485	2
CTATCTC	380	0.0	38.486843	5
CGGCTGT	1975	0.0	38.050632	9